Drosophila willistoni: 6640028
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Entry
6640028 CDS
T01067
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
dwi
Drosophila willistoni
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwi03400
]
6640028
DNA repair and recombination proteins [BR:
dwi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
6640028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
6640028
NCBI-ProteinID:
XP_002063290
UniProt:
B4MQ87
LinkDB
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Position
2L
Genome browser
AA seq
1815 aa
AA seq
DB search
MHSGQSQTHVQGKEKIIKSWSGIGEIAIIKEVATKGEHIDFCLEYWSQKRKIPLQEYRHY
FFDVVQAYVQRLLSERLVCKAENVLRNVEKDVKCFFYQYACECQDEELSEFVLDHLRSKE
SQLYEQEEPVLTYYWSLVQQLRECSSLMTRHKVQIPRLNIEALMSLPEESLQLLLVELYF
ANGNETLLVELNKELVWQHLVDNQLMDKLLKWLTCRQRAGATVQAESAPSKLEQCFESWP
IDASMYDYGVEQLKQPCEVLRNFFAKAGYFFADESSNISTQLRRLCTMGCLQDKEHADWL
SQQPLAKYLFERGYYRLLLMDCVPTAALEALANSQSELGPLLTLIMDLKKHPLNQTEGFQ
LIARSVQTYLEETHHGVEPLEEHPLLTFYDFLNQEPSIGLLEGFLTSTSLSRVPYLKSLS
ARFDHGPTGHPSGVPTPHELFLKFKKINLEAHSSELWSFSNSRLSQRYARKSQLNYTHYI
KQQRSAYAVYYLITEQLQLYGQITRAQLYHACETVTQLALRNAGDADLVTHCVACCEMLG
FDTQLLRSFLLLQRQLNSKSQTEYVSYSQMLGHWDQQIVKQLIAQPKEFPLELYQSLICL
ANRNALDEFPKNLLKYYASRDDWWPLLLIFQYFDLPLSELKKLLGHFKTNSLGLHMLQAL
SYDCPPFSTTTSHHHHHHHHHHHKRNFRRTEQTTASSQDTLTNSSNSSNQDAGNLSQRIR
DESFSCNNQDLFAILLTSSTNNLPDGEPIENIGKFMDMMYNQNPQCTWLNLLRNCVKYEM
PILAVLATTLSEQNRDWCWLVWLAVTSGQWGLLVKEAHLSLKDSNSTKLIWSLVRGAVFE
GQVNALLHSFIIFQTDSKFTHLCRFLHLTSHQEDFSDSTIDELRQFFYYLSQDRVNLPLC
PLQPRKLLMKSSINLLLTQLEKNFDCILQQERFLNCICRSDVGDICDLLDFCLLDKVFAV
SAKWMRQFSIDLEQLVGRNSPEYQRLVENLTEVKAYEEALEVASMLQLPLDDIVYGKWLD
ELVRGELRPQVEYEREIEKHFLPPAILVNFLLQAANRISGLKRYELLKSCLSVIKQHHLF
PNESFDRDQIEYDMTWSYLELAEDELPAIKIYYSEYFEQIMLKERCVLYKSFAELKELAG
IDDLSIANKSKLTPEMETRLNELLNTLLDEGDIVEALRLQELFEFRPNDLRFIVFAMALA
EGMTTISTLAIKERQLLSEVEKGAFPKFNRISLNQRCASDLSDSLSDAVEFEEIPAKEKQ
QTLDTLLGICSKLKHGVELGRRIVMAYRAAMYLDKEYMDVLRTKDATILLKSAADEDCLQ
RLLVVSDIHISTRMTPLEIAESLALELTTCMVRPRFYILEEPRNALRNANLWGHNIDRDF
HLFLELAPNTTLLGNCLMDYCDALKSYRRFQDNKPHEESEAFERLSQIIARYGIPKSVNA
GPQVLSHKKHNQIYVELLIKAHLCFVHECSMEGIANVLQRAKHLNSQLTKARSWSLIVRL
LIGIARYREMYYCFDALIDNDQFESLLGQFEDDQKLGLRQAILSYLREYQPNNGKELLRL
AALHFLMYKELAEMWAQDGQGLITRIRHQYEQAGKLKCCSEVQSLLQRAMENFSHSTENY
LLDNKLLLAQQNVAKAELMAMQLDLCNNHAEKRITSNMITSSTPICASVLGVESREHFRD
LVNTNLSVPQSLILSRAYGYDLNWSEALLCQFVILHKGNYLKEYLCHQVINDDIIEQAVK
GYLVQSTQGAVLSRQQEEQSLGQLVNLIKSVTLKYKLASMLGLKTIVMSLINESTVYYLR
DTNFGRKEFPNLVDS
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgcattccggtcagagccagactcatgtccagggcaaggagaagatcatcaagagttgg
tcgggcatcggtgaaatcgccataatcaaagaggttgccaccaaaggtgaacatattgat
ttctgtttggaatattggtcacagaagcgtaagattcccctgcaggagtatcgtcattat
ttctttgatgtcgtccaggcttatgtccagcgattgctctccgaacgtcttgtatgtaag
gcggaaaatgttctacgaaatgtggaaaaggacgtgaaatgcttcttctatcaatacgcc
tgcgagtgccaggacgaggaactctctgaatttgttcttgaccatttgagaagcaaggaa
tcccagctttatgaacaggaagagcctgtcctgacttattattggtctttggtccaacag
ttacgtgaatgcagttcattaatgacccggcataaggttcaaattccacgtttaaatatc
gaggccttgatgtctttaccggaagagtcactgcagctgcttttggttgaactttacttt
gccaatggcaatgagactcttctcgtggagctcaacaaggagcttgtgtggcagcatctg
gtagataatcaactaatggataaactgcttaaatggctcacttgtcgccagagagcaggg
gctacagttcaggcagagtctgccccatcaaagttggagcagtgttttgaatcttggccc
attgatgcatccatgtatgattatggcgtggagcaattgaagcaaccttgtgaagttttg
cgtaatttttttgccaaggctggttacttctttgccgatgaatcatcgaatatttccact
cagctacgtcgcctatgcaccatgggttgtcttcaggacaaagagcatgcagattggcta
agccaacagcccttggccaagtatttgttcgagcgtggctattatagacttttattgatg
gattgtgtacccactgcagctctggaagcgctagcaaatagtcaaagtgaactcgggcca
cttcttacattaattatggacctcaagaagcatccattaaaccaaactgagggatttcaa
ctgatagcccgcagtgttcagacatatttagaagaaacccatcatggagtagagcccttg
gaagagcatccacttttgacattttatgatttcttaaatcaagaacccagtattggactg
ctagagggtttcctcacatcaaccagtctgagtcgagtgccttatctcaagtctttatct
gcaagattcgatcatggaccaacaggtcatccctcaggagtcccaacgcctcacgaactt
ttccttaaattcaaaaagatcaatctggaagcacatagttcggaattgtggtctttctca
aactcccgcttgagtcagcgttatgccagaaagtctcaactgaattatacccattatata
aagcaacaaagaagtgcctatgcggtttattatttgataaccgaacagctgcagttatat
ggccaaataacacgagcccaattgtatcatgcctgtgaaacggtcacccagttggcctta
cgaaatgcaggagatgccgatctggtcactcattgtgtggcctgttgtgagatgttgggt
ttcgatacacaacttttgagaagttttcttctgctgcaacggcaattgaatagcaaatcc
cagacggaatatgttagctactcgcaaatgcttggccattgggatcaacaaattgtgaag
caattgatagcccagcccaaagaattccccttggaattgtatcaatctctcatatgtctg
gctaatcgcaatgctttagatgaatttccaaagaatttgcttaaatattatgcctcacga
gatgattggtggcctttgctattaatttttcaatactttgatttgcctttgagtgaacta
aaaaaacttttaggtcactttaagactaattctttgggtcttcatatgctacaagctctt
agctatgattgccctcctttctccaccacgacaagtcatcatcaccatcatcatcatcat
catcatcacaagagaaatttcagacgtacagagcagactacagcttcatcacaagatact
ttgaccaattcctcaaatagctccaatcaagatgctggaaatctatcacaaagaatcaga
gatgaatctttttcgtgcaataatcaagatctatttgccattctgctaaccagctccacg
aataatctgcctgatggagagccaatcgagaatattggaaaattcatggacatgatgtat
aatcaaaatccacaatgcacttggctgaatctattaagaaattgtgtgaaatatgaaatg
cctattttggcggtgctggccaccactctgagtgagcagaatcgcgactggtgttggctg
gtctggctggctgttacgagtgggcaatggggacttttggtaaaagaggctcatctctcc
ttaaaggatagtaattcaaccaagttgatatggtctctggtgcgaggagccgtctttgaa
ggtcaggtcaatgctttgctgcatagtttcattatatttcaaacggattccaagtttaca
catctctgccgatttctgcatttgaccagtcaccaggaggactttagtgactcaaccata
gacgagttgcgtcagtttttctattacctaagtcaggatcgggttaatttgcctttgtgt
cctctacagccacgtaaattgctgatgaagagttccattaacctgcttctcacacaattg
gaaaagaatttcgattgcattctgcaacaagaaagatttcttaattgcatttgtcgctca
gatgtgggtgatatttgtgatcttttggatttttgcctcttggacaaggtctttgctgtg
tccgctaaatggatgagacaattttctattgatttggagcaacttgtgggtcgtaacagt
ccggaatatcaacgactggtggagaatttaacagaggtcaaagcctatgaagaggcttta
gaggtggcctcaatgcttcaactgccgctagatgatattgtctatggcaaatggctggat
gaactggtcaggggagagttgcgtccccaagtggagtatgaaagagagattgagaaacat
ttcttgccaccagccatattggttaacttcctgctacaagcagccaatagaatatcgggt
ctgaaacgttatgagcttctcaaaagctgtctcagtgtcatcaagcaacatcatttattt
cccaatgaatccttcgatagagatcaaattgaatatgatatgacatggagttatctggag
ctagccgaagatgaattgccagcaattaaaatctattattcagaatattttgagcaaata
atgcttaaagaacgatgtgtactatataaatcatttgcggaactgaaagaactggctggc
atcgatgatcttagtatagcaaacaaatcaaaattaaccccagagatggaaacacgttta
aatgaactcctaaatactctactcgacgagggagacattgtggaggctctgcggctgcag
gaactattcgaatttcgaccaaatgatctgcgttttatagtctttgccatggctctagca
gagggtatgaccaccataagcactttggccatcaaagagcgtcaactgctgagtgaggtg
gagaaaggtgcatttcccaaattcaatagaatctctctgaatcagagatgtgccagtgat
ttatccgatagtctatccgatgccgtcgaattcgaagagattccagccaaagagaagcaa
cagacattggatacccttctgggcatatgttcaaagctaaaacatggcgtagaactgggc
agacgcatcgttatggcttatagagcagccatgtacttggataaggagtacatggatgtg
ttgcgtaccaaagatgccacaatattactgaaaagtgctgccgatgaggattgcttgcag
cgacttttagttgtgagtgatattcacatatcgacgagaatgacaccgttggaaatagct
gaaagtttggctttagagctaaccacatgcatggttcggccacgtttctatattctggaa
gagccaagaaatgccttacgaaatgccaatctctggggtcataatattgatcgtgacttt
catttattcctagaactggccccgaataccactctccttggcaactgtttaatggattat
tgtgatgctttaaaatcctacagaagatttcaggataataagccccatgaggagagtgag
gcctttgaacgtctctcacagatcatagcacgctatggcataccgaaatccgttaatgct
ggaccacaagtcttatcgcataagaaacataatcaaatctatgtggaactactgataaag
gcccatctatgctttgtccatgagtgctccatggagggcattgccaatgtgctgcagcga
gccaaacacttgaacagccaactaaccaaggcgagatcttggtctctgattgtacgtcta
ctcatcggcattgcccggtatcgagaaatgtattactgtttcgatgcccttatagacaat
gatcagtttgaatctctactcggccaatttgaggatgatcagaagttgggcctgcgccag
gccatcttaagctatttgcgtgaatatcaaccgaataatggcaaagaactgctacgattg
gctgccctgcatttcctcatgtacaaagagctggccgaaatgtgggcccaagatggtcag
gggttgataacacgaatacgtcaccaatacgaacaggcaggcaaactgaaatgttgcagc
gaagtgcagagtttacttcaacgggccatggagaactttagccattccacagagaattat
ttattggataacaaactgcttttggcccaacagaatgtagccaaggcagagttaatggcc
atgcaattggacctatgtaacaatcatgcggaaaaaaggattacctcaaacatgatcacg
tcaagtacaccaatttgtgcaagtgttcttggcgttgaatcaagggaacattttcgcgac
ttggtcaatacaaatttaagtgtgccccaatcattgatattgagtcgagcctatggatac
gatcttaattggagtgaggcattgctgtgtcaatttgttatccttcataaaggaaactat
ctaaaagagtatctttgtcatcaagtcattaatgacgacattattgaacaagctgtcaag
ggatacttggtacaatctacacaaggtgcagtgttaagtcgccaacaggaagaacaatct
ctcggtcagttggttaatttaattaaatcggtcactcttaaatacaaattggcctccatg
ctgggtctaaagactattgtaatgtctctgattaacgaatcgacggtttattatctgcgc
gatacaaatttcggtcgcaaggaattccccaatttggtcgattcgtga
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