Drosophila willistoni: 6640520
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Entry
6640520 CDS
T01067
Name
(RefSeq) exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
dwi
Drosophila willistoni
Pathway
dwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6640520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6640520
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
6640520
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
6640520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
6640520
NCBI-ProteinID:
XP_002063403
FlyBase:
FBgn0223406
UniProt:
B4MQK0
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Position
2L
Genome browser
AA seq
296 aa
AA seq
DB search
MAFVALSEAEKTFILHGVEENYRCDGRSRKDYRPMELETGLVSNASGSARLRLANTDILV
GVKTEIDVPDPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILALQNAYESPLSFD
YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALYNTKLPRVTASLLDAGITDL
IISDNPYDCTRLEIGTVPILVTVCKIGDYCLVDPSAEEEVCSTVSMVVAISMKNKEAYLS
GSHMTGGGSMHRDTMLNSLNLGLSIGEHLNTHLIKMLKQEEERVGPKRPKTVGFLK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgttgcacttagcgaagcggaaaagacatttattctacatggggtagaggag
aattatcgatgtgatggtcgctctcgaaaagattatcgtcccatggagctggagactggt
ctagttagcaatgccagcggttcggcacgtttacgtttggccaatacagatattttggtg
ggcgttaagacagagattgatgttcccgatcccttaactccggaatttggcaaactggaa
ttctttgttgattgttcagcgaatgccacaccagaatttgagggacgcggaggttctgac
ttggcccaggagttgatattagccttacagaatgcctatgaatcgcccttatccttcgat
tatcggactctctgcctcatacctggtcagcagtgctggaaactctacatcgatatattg
atattggagtgcggtggcaatctgcatgatgctgtgtccttggcggctaaggccgcctta
tacaacaccaaattacccagagtcactgcttccctgctagatgcaggcatcaccgatctc
attatatccgataatccatatgattgtactagattggaaataggcaccgtgcccatattg
gttacagtttgcaagattggtgactattgtctggttgatccttcagcggaggaggaagtt
tgcagcacagttagcatggtggtagccatatccatgaaaaacaaagaggcatatctctct
ggttctcatatgactggaggtggttcaatgcatcgggatactatgctaaattccctaaat
ctgggcctgtccattggtgagcatctgaatacacatctcattaaaatgcttaagcaggag
gaagagcgtgtgggtcccaagcgaccaaaaactgttggttttcttaaatga
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