Drosophila willistoni: 6640830
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Entry
6640830 CDS
T01067
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dwi
Drosophila willistoni
Pathway
dwi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6640830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6640830
03041 Spliceosome [BR:
dwi03041
]
6640830
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6640830
Spliceosome [BR:
dwi03041
]
Complex B
Other components
Prp19-related factors
6640830
Complex C
6640830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_12
TPR_15
TPR_2
Mad3_BUB1_I
PPR
RPN7
TPR_8
ARM_TT21_C
ARM_TT21
TPR_10
Motif
Other DBs
NCBI-GeneID:
6640830
NCBI-ProteinID:
XP_002064006
UniProt:
B4MSA3
LinkDB
All DBs
Position
2L
Genome browser
AA seq
886 aa
AA seq
DB search
MLAKTAKQTLDVELNFEEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNLVYERAL
KELPGSYKIWYNYLRTRRKQVRGRIPTDPMWEEVNNTFERALVFMHKMPRIWMDYGVFMT
SQSKITRTRHVFDRALRALPITQHGRIWPLFLKFVQKFHIPETALRVYRRYLKLFPEDAE
EYVEYLQSVGKLDEAAQQLASIVDNEHFGSKHGKSQHQLWNELCDLISKNPHKVHSLNVD
AIIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQ
FEELSLNKRMEQVAAAGEDATEEDDIEVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHE
WHKRVKLYEDKPTDIINTFTEAVQTVQPKLAVGKLHTLWVEFAKFYETNGQIEDARVVFE
RGTEVAYIKVEDLASVWCEWAEMELRQQQFEAALKLMQKATVMPKRKISYHDETETVQMR
LFKSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGLFLEEHNYYEDAYR
AYEKGIALFKWPNVYDIWNSYLTKFLARYGGTKLERARDLFEQCLSDCPAEHAKYFYLLY
AKLEEEHGLARHAMAVYDRATSAVKEEEMYDMYNIFVKKAAEIYGLPRTREIYEKAIEAL
PEQNMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDT
MREMLRIKRSVQATYNTQVNMMAAQFLQTNNNGSAADTGAGTDAMRQLEEKAAAKAAAEA
AANKTKPTTAPSNIMFVRGETQGGKKDKENTVVNPDEIDLGDSDEEDDEDEEENTNGANQ
ESNEASTKVDDEGLVMKKLRFEQKAIPAKVFGTLKPTNQQGDSDEE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaaaaacagcaaaacaaacgttggacgtggaacttaactttgaagaagaggat
gtgccgtatgaggaggaaatcctacggaatgcctattcggtaaagcactggctgcgctac
atcgatcacaaggcaaaggctccgaataatggtgttaatctggtatacgagcgtgcatta
aaggagctaccgggcagttataaaatatggtacaattatctacggacccgcaggaagcag
gtgcgtggccgcatacccaccgatcccatgtgggaggaggtgaacaatacttttgaacgg
gctctggtatttatgcataaaatgccacgcatttggatggattatggtgtctttatgaca
tcgcagagtaaaattacccgaacgcgccacgtcttcgatagagcattaagagcgttgcct
attacccagcatggaaggatttggcctttgtttttgaaatttgtacaaaagtttcatatt
cccgagacggcattgcgtgtatatcgcagatatctaaaactttttccggaagatgccgag
gaatatgtagagtatctacaaagtgtgggcaaattggatgaagctgctcagcaattggcc
tccatagtggataatgaacattttggttcgaaacatggcaaatcccagcatcaattgtgg
aacgagctatgcgatttaatatcaaagaatccccacaaagttcattccctaaatgtggat
gctataattcgaggtggtctacgtagatataccgatcaattgggtcatttgtggaattct
ctagccgattattatgtgcgttctggtctattcgatcgggcaagggatatatacgaagaa
gccatacaaactgtgaccacagtaagagattttactcaggtctttgatgaatatgcccaa
tttgaggaattgtcgcttaacaaacgcatggaacaagtggccgctgctggtgaagatgcc
accgaagaggatgatattgaggtggaattgcgtctatcacgctttgagtatctaatggag
cgtcgtctgctattgctaaatagtgttctactacgccagaatcctcacaatgtccatgaa
tggcataaacgtgtaaaattgtatgaggataaacccacggacataatcaatacctttacg
gaagctgtgcagacagtgcaacctaaattggcagtgggtaaattacatactctgtgggtg
gaatttgccaaattctatgagacaaatggtcaaatagaagatgcccgtgtggtctttgaa
cgtggcaccgaagtggcttatattaaggttgaagatctggcctccgtgtggtgtgaatgg
gccgaaatggaattgcgtcaacagcaatttgaagctgccctcaaattaatgcaaaaggca
actgtaatgcccaaacgtaaaatctcctatcatgatgaaacggagactgtccaaatgcgt
ctgttcaagtcattgaaagtctggtccatgtatgccgacctggaggaatcttttggtacc
tttaagacctgcaaggcggtctatgagcgtataatagatttgaaaatatgcacaccacag
attatcattaattatggcttattcctggaggagcacaactactatgaggatgcctacaga
gcgtatgagaagggaattgctctcttcaaatggccaaatgtatatgatatatggaattcg
tatttaaccaagtttctggcacgctatggtggcacaaaattggagcgagctcgtgatctt
ttcgagcaatgtctaagcgattgcccggcagagcatgccaaatacttttacttactctat
gccaaactggaggaggaacatggtctggccaggcatgccatggccgtctacgatagggca
acttcagctgttaaagaagaagaaatgtatgacatgtacaatatattcgttaagaaggca
gctgaaatctatggtctgcctaggactagagagatctatgagaaggctattgaagccttg
ccggaacagaatatgcgtcatatgtgcgtgaaatttgctgaattggaaaccaaattgggt
gaagtcgatcgagccagagccatctatgcacattgctcgcaggtttgtgatcctcgcatt
actgcggacttttggcaaacttggaaggaattcgaagtgcgtcatggcaatgaggatact
atgagagaaatgctgcgcattaaacgctctgtccaggccacttacaatacccaagtcaat
atgatggctgcccaatttctgcagaccaataacaatggctctgccgctgatacaggcgcc
gggaccgatgccatgcggcagctggaagagaaagcagccgccaaagctgctgccgaggca
gcggccaataaaacgaaacccacaactgctccatcgaacattatgtttgtgcgtggcgag
actcagggtggcaaaaaagacaaggagaatacggtggttaatccagatgaaatcgatttg
ggtgacagtgacgaggaagatgatgaggatgaagaggagaacactaatggggcaaatcag
gaatccaatgaagcttctacaaaagtcgatgacgaaggtttggtcatgaagaaattacgt
ttcgaacaaaaggccataccagccaaggtatttggcactctgaagcccaccaatcaacag
ggcgattctgatgaggaataa
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