Drosophila willistoni: 6643345
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Entry
6643345 CDS
T01067
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dwi
Drosophila willistoni
Pathway
dwi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6643345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dwi03041
]
6643345
Enzymes [BR:
dwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6643345
Spliceosome [BR:
dwi03041
]
Complex C
Other components
Step II factors
6643345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA
Motif
Other DBs
NCBI-GeneID:
6643345
NCBI-ProteinID:
XP_002066074
UniProt:
B4MY71
LinkDB
All DBs
Position
2L
Genome browser
AA seq
1250 aa
AA seq
DB search
MDELQQLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRSYEAFRKALADNGAEFP
DSLVQNLQRIINLMRPSRPKDDKIPAGSTGKDDKKSELMKMFPGLALPNDTYSKTENEDH
KEDRKDEKQKPDKKDRKESKPKISEMSDVDAAMLELEALAPGENKAKESSTKRRERSRSR
NRDRDRRKRSKSRGNRDGHRSKSRERDRSRRNSRRSRSREDGHGERDRRRSRDREHRARD
DRRRRSRSREDRDRRRRSRSREERRHRSRSRDRREKMPPPTAVMADDPEAGKIYSGKVAN
IVDFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVSRNQTVKVKVMSITGQKVSLS
MKEVDQESGRDLNPLSHAPEDEDISLRDRNPDGPFSSSTSMLNLQGNNLDGDEHESRKRV
TRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPKDEDDEADIEIEIVEEEPPFLSGH
GRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEMEALPTNLNKNWIDP
LPEEDSGRHLAANMRGMGLAPQEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLR
DDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVA
EEYGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMEAELKGYSVIMLDEAHERT
IHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKE
PETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILP
VYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM
DSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQ
LKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSK
MLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNS
WKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGF
FRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPK
WLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattgcagcagctggagtatctatcgctggtctccaaaatttgtacagagttg
gacaaccatttgggcatcaatgacaaggatttggctgaatttattattgacttggagaac
aagaatcgcagctatgaagcgttccgcaaggctttggcagacaatggagctgagtttcca
gactctttggttcagaatttacagcgtatcattaatcttatgcgtcctagccgtcctaaa
gacgataaaattcctgctggttcaacgggaaaggatgacaaaaaatcggaacttatgaag
atgtttccgggtttagcattacccaatgatacgtacagcaaaactgaaaacgaagaccat
aaagaggacagaaaagatgaaaagcaaaaaccggacaagaaggatcgcaaggagagcaaa
ccaaaaatttccgaaatgagcgatgtggatgctgcgatgttggaactggaggcattggct
ccgggagagaataaagcaaaagaatcatccacaaagcgcagagagcgtagtcgtagtcgc
aatagagatcgggatcgacgaaagcgtagtaagtctcgcggaaatcgagatggccatcgg
agcaagtctcgcgaacgcgatcggtcacgccgtaacagcagacgaagcagatcacgtgaa
gatggccatggagaacgagatcgtcgtaggagtagagacagagaacaccgcgctcgtgat
gatcgtcgtaggcgaagcagatctcgagaggatcgagatcgccgcagaaggagcaggtcc
cgagaagaacgacgccatagatcgcggtcccgggaccgacgagaaaaaatgccaccacca
accgccgttatggctgatgacccagaagctgggaaaatctactccggtaaggtggccaat
attgttgactttggttgttttgtgcagctttttggcctgcgtaagcgctgggagggttta
gttcacatatctcagctgagagcggagggacgtgtaaccgatgtgacggaggtagtaagc
cgtaatcagacggtcaaggttaaggtgatgtccatcactggtcaaaaggtatccctctcg
atgaaagaagtcgatcaagagtccggccgagacttaaaccctctctcgcatgctccagag
gatgaagacatatcgttgagggatcgcaatccggatggtccgtttagcagcagcacctcc
atgctaaatctgcagggaaataatctcgacggtgatgagcatgagtcaagaaaacgtgta
accagaatatccagtcccgaacggtgggagattaagcagatgatcagctctggagtgctt
gatcgcagcgaaatgccagattttgatgaggaaactggtttgcttcccaaggacgaggac
gatgaggccgatatagaaattgagattgttgaagaagagccacccttcctctcaggccat
ggacgagccctccacgatctatccccagtgaggattgtgaagaatcccgatggatctctc
gcgcaagcagcaatgatgcaatcggctctttccaaagagcggcgtgaacagaaaatgttg
cagcgcgaacaagaaatggaagcgttgcccaccaatctcaacaaaaactggatcgatcct
ttgccagaggaggactctggtcgtcatttagcggcaaatatgcggggcatgggactagct
ccccaagaagtgcccgaatggaagaagcatgtaattggaggaaaaaaatcatccttcggc
aaaaagacggacttaacgcttgttgagcagcgacaatctctgcccatctacaagctacgc
gatgatctcatcaaggcggtgacagacaatcaaattctgattgttatcggggagactgga
tccggtaaaactacccaaatcacccaatatctaggtgaatgcggatttacggcacgtgga
aagattggatgcacacaaccgcgtcgtgtggctgccatgtcggtggcaaaacgtgtggcc
gaggaatatggttgccgtcttggtcaagaagtgggctataccatacgtttcgaggattgc
accagtccggagactgtaatcaagtacatgacagacggcatgttgctccgcgaatgcctt
atggaggctgaacttaagggctattcagtcatcatgttggatgaggctcacgaacgaaca
attcacactgatgttctgtttggtctgctgaagacggccgtgcaaaaacgcccggaattg
aaactaattgttacctcagccactttggatgcggtcaagttttcgcagtatttctttgaa
gctcccatttttacaattcctggacgtacatttcccgtggaggtgttgtatacaaaggag
ccggagaccgactatttagatgcctctctaattacggtgatgcaaatacatttgcgtgaa
ccgcccggtgatattttgcttttcctcactggtcaggaggagattgacacggcctgcgag
atattatacgagcgcatgaagagtctaggccccgatgtgcccgaactgatcattttgcct
gtctattctgctctgccatccgagatgcaaacacgcatctttgaccctgctccggcaggc
agtcgtaaggtggtaatcgccacgaatatcgctgagacttcactaaccatagatggtata
ttttatgtggtggatccaggatttgttaaacagaaagtctacaactcgaagacgggcatg
gattcgcttgtagttactcccatttcgcaggcagcagccaagcaaagagctggcagggca
ggacgtactgggccaggaaaaacctatcgtctttacacggagcgagcttatcgggatgag
atgttgccgacgcccgtgcccgaaatccaacgtaccaatctggcaaccacagtgcttcaa
cttaagaccatgggtatcaatgatctgctgcactttgatttcatggatgcaccaccagtg
gagtctttggttatggccttggaacagctgcattcactctcggctcttgatgatgagggc
ttacttacccgtttgggtcgtcgcatggccgaatttccacttgagccgaatctctccaaa
atgcttatcatgtcggtagccctgcagtgttctgatgagattttgacaattgtgtccatg
ttgagtgtgcaaaatgtgttttacaggccaaaagataaacaggcgttggccgatcagaaa
aaggcaaaatttaatcaagctgagggtgatcacttaaccctgttggcagtctacaacagt
tggaagaataacaaattctcgaatgcttggtgttatgaaaattttgttcagatacggaca
ttaaaacgttcacaggatgtacggaaacaactgcttggtattatggatcgtcataaattg
gatgtggtatcggcgggcaagaattctgtgcgcattcaaaaggcaatttgttctggcttc
tttcgtaatgctgcaaaaaaggatccacaggaaggttatcgtactctggttgattctcag
gtggtttacattcatccttcaagtgctctgttcaatagacagcccgaatgggtcatctat
catgaactggtgcagaccaccaaagagtatatgcgcgaggtgaccacaattgatccaaaa
tggttggtggaattcgctccatccttcttccgcttctctgatccaaccaaactgagtaaa
tttaagaaaaatcaacgacttgagccattgtacaacaaatatgaagagcctaatgcttgg
agaatatcccgagttaggcgcagacggaattaa
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