Drosophila willistoni: 6644026
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Entry
6644026 CDS
T01067
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dwi
Drosophila willistoni
Pathway
dwi03008
Ribosome biogenesis in eukaryotes
dwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6644026
09123 Folding, sorting and degradation
03018 RNA degradation
6644026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dwi03021
]
6644026
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6644026
03009 Ribosome biogenesis [BR:
dwi03009
]
6644026
03016 Transfer RNA biogenesis [BR:
dwi03016
]
6644026
Transcription machinery [BR:
dwi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6644026
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
6644026
Ribosome biogenesis [BR:
dwi03009
]
Eukaryotic type
Pre-60S particles
RNases
6644026
Transfer RNA biogenesis [BR:
dwi03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
6644026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
6644026
NCBI-ProteinID:
XP_023032629
LinkDB
All DBs
Position
2R
Genome browser
AA seq
924 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECNENKKLDPETGKNTYEDSTLPNPNGLEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRF
RAAKETIEKRAEIERIREELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV
HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAANFKPDVPIGA
EVKFIFVRLSVLREYLKKTLEMPNLPFAYDFERALDDWVFMCFFVGNDFLPHLPSLEIRE
GAVDRLVELYKKCVYKTQGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKDRQRREKQFRDR
EKKKKQWERNDMKSLEQSVFGPQAVGAGKGDGPTNIQNYKAEAAALRLGQKRSGADAGLQ
AEEEDEDCNDEVRLWEDGFKNRYYESKFDVGPDNLQFRYAVALQYVRGLCWVLKYYYQGC
SSWNWYFPYHYAPFASDFVNIQGLSTLFEKGTKPFNPLEQLMGVFPAASSSHVPQPWVEL
MSSPTSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPFYEQLTSEEVKRN
KRGNNYLYISKESPHFKVANKIYRQKKDDEVAQFDEEEGYPISLDGMRGTINRTELSTAI
NAILQSPIGDLPDITDNQILTTTFNDPQYDEDYIFPAKRLPKAVDPPQVLSPEDHHNKTG
PVIGFNSHLQRAYVPQGGHRLITNSMQRNQGGYGGGGGGGGGQGQGGGYQRNYNNYNNNY
QQGQQGNYNNYQRNQQQPQQQQHYGGQNQRRQQQNYNNNYNQNNGQRYNSNYNNYNNNNN
PQQRGNYNNNRGGGQQQHSNYRRF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattttttcgctggcttagccgaaagtatccgagtgtgataattgag
tgcaatgaaaacaagaaacttgacccggaaacgggtaaaaacacctacgaggactccaca
ttgccgaatcccaatggactggagtttgataatttatatctggatatgaacggtattatt
catccgtgtacgcatccagaagacaagccggcaccgaagaacgaggacgaaatgatggtt
gccatttttgagtgcattgatcggctttttggcatagttcgaccacgtaaggtgctctat
atggccatcgatggagtggcgccgcgtgccaagatgaaccagcagaggtcacgtcgattc
cgtgcagccaaggagacaatcgagaagagggcagagattgagaggattcgagaagaacta
atgaccaagggctgcaagttgccgccagaaaaggagaagggtgaacatttcgattccaat
tgcattaccccaggaacaccgttcatggatcgattgagtaaatgtttgcactattatgtg
catgaccgtttgaacaacaacccagcctggaagggtgtcaaagtcatcctatcggatgcc
aatgtgcccggcgagggggagcacaaaattatggactatatacgcaaacaacgggctcag
cccgatcatgatcctaatacgcagcatgttctatgcggcgccgacgcagatttgattatg
ttgggtcttgccacccatgagcccaattttaccattattcgggaagagtttttgccgaat
aagccacgaccatgcgatgtgtgcaatcaatttggtcatgaaatggacaaatgtatgggg
ctgaatgccatcggctccacatcggcggccaatttcaagcccgatgtacccataggagct
gaagtaaaattcatatttgtgcgcctaagcgttctgagggaatacttgaagaaaactttg
gaaatgccgaatctaccatttgcctatgattttgaacgcgctttggatgattgggtattc
atgtgtttctttgtgggcaatgattttctaccccatttgcctagtctggagatcagagag
ggagcagttgatcgccttgtggagctgtacaagaaatgtgtatataagactcagggctat
ctaaccgattccggtgatgtcaatttagatcgcgtgcaactgattatgactgatttgggt
aatgccgaggatcagatctttaaggatcgtcagcgcagggaaaagcaattccgagatcgt
gagaagaagaagaagcagtgggagcgtaacgatatgaaatccttggaacagagtgttttc
gggccacaagctgttggcgctggaaagggagacggtccgaccaatatacaaaactacaaa
gccgaagctgctgccttaagattgggccagaaacggtcgggtgcagatgctggcttacaa
gccgaagaggaggatgaggattgcaatgatgaggtgcgtttatgggaggatggtttcaaa
aatcgttactacgaatcgaaatttgatgtgggaccagataatctacaattccgatatgcc
gtcgccttgcaatatgtccgtggactttgttgggtactgaaatattattaccaaggctgc
tcctcctggaattggtatttcccctatcattatgcaccattcgcctcggatttcgtgaat
attcagggactgtccacattatttgagaagggcactaaaccctttaatccgctcgagcag
ctgatgggcgtgtttccagccgccagtagctctcatgtaccacagccatgggtggaactt
atgtccagtccgacatcaccaattatcgatttctatccggaagatttcaaaattgatttg
aatggcaagaagtttgcctggcaaggcgttgccctgctgccttttgtggacgagaaacga
ctcttcaaagcactggtgcccttctatgaacaattgaccagcgaggaggtgaagcgaaat
aagcgtggcaacaattacctatacattagtaaggagagtccacactttaaggtggccaac
aagatctaccgccagaaaaaagacgatgaagttgcccagtttgatgaagaagaaggctat
cccatttccttggacggcatgagagggacaattaatagaacggaacttagcactgccata
aatgctatactccagtcacctattggtgatctccccgatatcacagataatcagattttg
acgacaacattcaatgatccccaatacgatgaggattacatatttccggccaagcgtctg
cctaaagctgtggatccgccccaggttctatccccagaagatcatcataacaaaactggg
ccagttattggcttcaatagccacttacagcgtgcctatgttccacaaggtggtcatcgt
ttgatcaccaatagcatgcaacgtaatcaaggtggctatggtggtggaggaggaggagga
ggtggacaaggacaaggtggtggttaccagaggaactataataactacaataataattat
caacaaggacaacaaggaaattataacaattatcagcgaaaccaacaacaaccacaacaa
cagcaacattatggaggtcaaaatcaaagaaggcaacaacaaaattataataataattat
aatcaaaacaatggacaacgttacaattcaaattacaacaattacaataataataacaat
ccacaacaaagaggcaactacaacaacaatcggggcggtgggcaacaacagcactcaaat
tatagaagattttaa
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