Drosophila willistoni: 6644546
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Entry
6644546 CDS
T01067
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
Organism
dwi
Drosophila willistoni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
6644546
NCBI-ProteinID:
XP_023032884
LinkDB
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Position
XL
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AA seq
1624 aa
AA seq
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MTNKTTRLLLLLVFTALAGRQQVDAAVAGLKCSGKAAICVGPTSYQACVDDVATGSIVSC
QANTRCVTDGVEICVAIKITAEAPTAAVAKMVTVTDGPVSGSIADSAALVEAVSFSSTDG
VAPAETSSAAIETTTVSAADGPTTTTLSEDTTSDPNGPVDTTTPAVVDETTGPAEPSNPQ
ETTAEPGVTDSNTPNEPAGTTYAPGELSPNGPADTTEDPVNPNSPQETTPISDDPAGTTN
DPWSTDAPGTSVDPDVPAGTTDAPGTPADPEIPAGSTAAPGTPADPNAPAGSTAAPGTPA
DPNAPAESTAAPGTPADPNAPAGSTDAPGTPADPNAPGETTAAPGTPADPNAPVETTAAP
GTPVDPNAPAGSTAAPGTPADPNAPAGSTAAPGTPVDPNAPAGSTAAPGTPADPNAPVET
TAAPGTPADPNAPGETTAAPGTPADPNAPAGSTTAPGTPADPNAPVETTAAPGTPVDPNA
PAGSTAAPGTPADPNAPVETTAAPGTPADPNAPVETTAAPGTPADPNAPAGSTAAPGTPA
DPNAPAESTAAPGTPADPNAPAGSTSAPGTPADPNAPVETTAAPGTPVDPNAPAGSTAAP
GTPADPNAPAGSTAAPGTPADPNAPAGSTAAPGTPADPNAPVETTAAPGTPADPNAPAGS
TAAPGTPADPNAPAGSTAAPGTPADPNAPAGSTAAPGTPADPNAPAGSTIAPATPADPNA
PAGSSVAPGTPADPNAPAGSTAAPGTPADPNAPAGSTAAPGTPADPNAPGGSTAAPGSPA
DSNAPAGSTAAPGTPADPNAPAGSSVAPSTPADPNAPVGSTAAPGTPADPNAPAGSTAAP
GTPADPNAPGGSTAAPGSPADSNAPARSTAAPGTPADPNAPAGSSVAPSTPADPNAPVGS
TAAPGTPADPNAPAGSTAAPGSPADPNAPAGSTAAPGTPTDPNASAGSSVAPGTPADPNA
PVGSTAAPGTPADPNAPGGSTAAPGSPADSNAPAGSTAAPGTPADPNAPAGSSVAPSTPA
DPNAPVGSTAAPGTPADPNAPAGSTAAPGTPADPNAPGGSTAAPGSPADSNAPARSTAAP
GTPADPNAPAGSSVAPSTPADPNAPVGSTAAPGTPADPNAPAGSTAAPGSPADPNAPAGS
TAAPGTPTDPNASAGSSVAPGTPADPNAPVGSTAAPGTPADPNAPGGSTAAPGSPADSNA
PAGSTAAPGTPADPSAPAGSSVAPGTPADPNAPAGSTATPGTPADPNVPAVSTAAPGTPA
NPNVPSVSTAAPGTPANPNVPSVSTTAPGTPASPNVSSGSAAAAGNPVASNVPSASAVAP
GISTNPNSPAIPSIPVHPGNPGAWPWRPVHPNQALIPGGHPWSTFRPYPAQPQRPFWPVR
PQHPIANGGQPIPSQRPPLPFWANWHNWANSWRTTTQSSTEATATSPTPKSETAESVEQP
SAGGPSISNENASVEDSNKSTRDKPKSAENSSTEDKKEKKQSKDSAEESNKKSKETQKSA
EDQSKEQKPTSTENNSTEDRKEKPSKSKDSKESNDEEEEDNEKPSSKEKKQYIKDIIKKL
KNEDECDEGDLYPDVRDCRKYYRCEIKKSGKHKLSHNRCENSKDRFDFLSLKCLPKDEAV
CLNK
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaaaacaaccagactacttctattgcttgtgtttacagccttggctgggcgg
caacaagttgatgctgctgtagcgggtctcaagtgcagtggtaaagctgctatctgtgtg
ggaccaactagctatcaggcgtgtgtggatgatgtggccacgggcagcattgtttcgtgc
caggccaatacgcgttgtgtgaccgatggagtcgagatttgtgtggccattaagataaca
gccgaggcaccgacagcagctgtggccaaaatggtgacagtcactgatgggccagtaagt
ggcagtatcgctgactccgctgctttagttgaagccgtatcattttcctccaccgacggt
gttgcgcccgcagagacatcgtccgccgcgatagagacaacaaccgtgagtgctgctgat
gggccgacaaccaccactttgtcggaggatacaaccagtgatcctaatggccccgtggat
accacaacaccggcagtagtggatgaaaccacaggaccagctgaaccctccaatccccag
gaaaccactgccgagccaggggtaacagattcgaatacaccaaatgaaccagcgggaaca
acgtatgcaccaggagaactgagccccaatggtccagctgacaccaccgaagacccagta
aatccaaattcaccacaagaaactactcccatatccgacgatcccgcaggaacaactaat
gatccatggtcaactgatgccccaggaacttcagtagaccctgatgttcctgccggaaca
accgatgctccaggaactccagctgatcctgagatacccgccggatcaaccgctgctcca
ggaactccagctgaccccaatgctcctgctggatcaaccgcagctccaggaactcctgct
gaccccaatgctcctgctgaatcaaccgctgctccaggcactcctgctgatcccaatgct
cctgctggatcaaccgatgctccaggaactcctgctgatcccaatgctcctggtgaaaca
accgctgctccaggaactccggctgaccccaatgctcctgttgaaacaaccgctgctcca
ggcacccctgtagatcccaatgctcctgctggatcaaccgcagctcccggaactcctgct
gaccccaatgctcctgccggatcaaccgctgctccaggcacccctgtagatcccaatgct
cctgctggatcaaccgcagctcccggaactcctgctgaccccaatgctcctgtcgaaaca
accgctgctccaggtactcctgctgaccccaatgctcctggtgaaacaaccgcagctcca
ggtactccagctgaccccaatgctcctgctggatcaaccactgctccaggaactcctgct
gaccccaatgctcctgttgaaacaaccgctgctccaggcacccctgtagatcccaatgct
cctgctggatcaaccgcagctcccggaactcctgctgaccccaatgctcctgtcgaaaca
accgctgctccaggtactcctgctgaccccaatgctcctgttgaaacaaccgctgctccc
ggaactcctgctgaccccaatgctcctgctggatcaaccgcagctccaggaactcctgct
gaccccaatgctcctgctgaatcaaccgctgctccaggcactcctgctgatcccaatgct
cctgctggatcaacctctgccccaggaactcctgctgaccccaatgctcctgtcgaaaca
accgctgctccaggcacccctgtagatcccaatgctcctgctggatcaaccgcagctccc
ggaactcctgctgaccccaatgctcctgctggatcaaccgcagctcccggaactcctgct
gaccccaatgcccctgccggatcaaccgcagctcccggaactcctgctgaccccaatgct
cctgtcgaaacaaccgctgctccaggtactcctgctgaccccaatgctcctgctggatca
accgcagctcccggaactcctgctgaccccaatgctcctgccggatcaaccgctgctcca
ggtactccagctgaccccaatgctcctgctggatcaaccgctgctccaggaactccagct
gatcccaatgctcctgctggatctactatagctccagcaactcctgctgatcccaatgca
cctgctggatcaagcgttgcaccaggtactcctgctgaccccaatgctcccgctggatca
accgctgctccaggaaccccagctgaccctaatgctcctgccggatcaaccgctgctcca
ggaaccccagctgaccccaatgctcctggcggatcaaccgctgctccaggatccccagct
gactccaatgctcctgccggatcaaccgctgctccaggaaccccagctgaccccaatgct
cctgccggatcaagcgttgcgccaagcactcctgctgaccccaatgctcctgttggatca
accgctgctccaggaaccccagctgaccccaatgctcctgccggatcaaccgctgctcca
ggaaccccagctgaccccaatgctcctggcggatcaaccgctgctccaggatccccagct
gactccaatgctcctgcccgatcaaccgctgctccaggaaccccagctgaccccaatgct
cctgccggatcaagcgttgcgccaagcactcctgctgaccccaatgctcctgttggatca
accgctgctccaggaaccccagctgaccccaatgctcctgccggatcaaccgctgctcca
ggatccccagctgaccccaatgctcctgccggatcaaccgctgctccaggcaccccaact
gaccccaatgcttctgccggatcaagcgttgcgccaggcactcctgctgaccctaatgct
cctgttggatcaaccgctgctccaggaaccccagctgaccccaatgctcctggcggatca
accgctgctccaggatccccagctgactccaatgctcctgccggatcaaccgctgctcca
ggaaccccagctgaccccaatgctcctgccggatcaagcgttgcgccaagcactcctgct
gaccccaatgctcctgttggatcaaccgctgctccaggaaccccagctgaccccaatgct
cctgccggatcaaccgctgctccaggaaccccagctgaccccaatgctcctggcggatca
accgctgctccaggatccccagctgactccaatgctcctgcccgatcaaccgctgctcca
ggaaccccagctgaccccaatgctcctgccggatcaagcgttgcgccaagcactcctgct
gaccccaatgctcctgttggatcaaccgctgctccaggaaccccagctgaccccaatgct
cctgccggatcaaccgctgctccaggatccccagctgaccccaatgctcctgccggatca
accgctgctccaggcaccccaactgaccccaatgcttctgccggatcaagcgttgcgcca
ggcactcctgctgaccctaatgctcctgttggatcaaccgctgctccaggaaccccagct
gaccccaatgctcctggcggatcaaccgctgctccaggatccccagctgactccaatgct
cctgccggatcaaccgctgctccaggaaccccagctgaccccagtgctcctgccggatca
agcgttgcgccaggcactcctgctgaccccaatgctcctgctggatcaaccgctactcca
ggaaccccagctgaccccaatgttcctgctgtttcaaccgctgccccgggtactccagct
aatcctaatgttccttctgtttcaaccgctgccccgggtaccccagctaatcctaatgtt
ccttctgtttcaaccactgctccgggaactccagctagccccaatgttagttctggttca
gccgctgctgctggcaatccagttgcttctaacgttccctctgcctctgctgttgctcca
ggaatttcaactaatcccaattcaccagccattccttcgattcctgtacatccaggcaat
cctggcgcttggccttggcgtcccgtacatccaaatcaagcccttatcccaggaggtcat
ccgtggtccactttccgcccttatccagctcagccacagagaccattttggcctgttcgt
ccccagcatccaatagctaatggaggccaacccatcccatcgcaaagaccccccctgcca
ttctgggcaaactggcacaactgggctaacagctggcgcaccaccacgcagtcctcgaca
gaggcgacagcaaccagcccaactcccaaatctgaaacggcagagtcggtggaacagcca
tcagctggtggtccttctatttccaacgaaaacgcttccgtagaagatagcaacaagagt
accagggataaaccgaaatctgcagaaaacagctcgaccgaggacaaaaaggagaaaaag
caatcaaaagactctgcagaagagagcaataaaaaatccaaggaaacacaaaaatctgct
gaagatcaatccaaagagcaaaaacctacttccacagagaataattcaacggaggacaga
aaagagaagcctagcaagtcaaaagactctaaagaatccaacgacgaagaagaagaggac
aatgagaaacctagttccaaggaaaagaaacagtacataaaggacatcatcaagaaacta
aagaacgaagacgaatgtgacgaaggtgatctgtacccggacgtaagagattgtcgtaaa
tattatcgctgcgagataaagaaatcaggcaaacataagttgtctcacaatcgctgtgag
aatagcaaagatcgctttgatttcctcagcctgaaatgtttgcccaaggacgaggctgtc
tgcctaaacaagtga
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