Drosophila willistoni: 6647022
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Entry
6647022 CDS
T01067
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
dwi
Drosophila willistoni
Pathway
dwi03013
Nucleocytoplasmic transport
dwi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6647022
03015 mRNA surveillance pathway
6647022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6647022
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6647022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
6647022
NCBI-ProteinID:
XP_023034110
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All DBs
Position
3R:complement(25420170..25423687)
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AA seq
872 aa
AA seq
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MAEIEKMTAAVDQPDPAPVSAADPVPVPETVKPTTTTSVASPTDIPVTATDTVSSETPEL
GTSPTQEPSSNSHPHDSEYDTASDLEGGEEYDDDDDDDEDDDGESGSEDDTETDEETEED
EDGAGEMPDGDTSSAAAAAAAAQKKVDEDRSNPQYIPKRGTFYEHDDRTAETEVNIVIED
DSQSQSLTEINGDANSVGGGAAQSAAGEGASGASVGGQTPTISQASKTMKKWQPASGGDR
WSHDRFEANEQAPKSRAELLQTYGYDIRNEDAAPRARRRRRYGRGPSKYSRNWEDEQAYL
KASNKERKPPRPQDFPALNERKVSRRPLAASGRAEKENRRGGVGAGAPGGSQEQPRHYGR
HSNGSSAGRQNAMEFKQKSNRGPHPQPRERERERDRVDRDQPVEQHTKPTTPRANGQTIQ
NNEGLQVQPNTNQQHQQQTQTQQRQQPIQQQQQHQPQQQLPLPTPPTQNQIPPLSTTNLS
QRLQQVQQRNDPSHVGSVQMQALATQNQQQQQQQQQVHMQQQSQSVAPKRYSSLRRSQQQ
QDQIQQQIQMQQQQQQQQQQSQIILQDPHMLMQIAYQQQELQAQLQGLQLGPAPGPASVP
PPAAKQPAQPPAAAAYAPAQGAPYYVTGAEAGPYGNPAAAAAAAAAYLPTTPAAVAYAQA
QAQSAPAQPQAPPQAQVAATQSAQAPPPSMNYHQNYNTVGGTTYFVPPAQTTSRPTQLPQ
RRPTNAIPILPPSEKHKSRGAASGAGSGGGQPKEEGGNSDNIDHILDNMFVQRPAFQAPA
DSAATSSKEDTTTTSINNAATSNSSTSSGAIPEQNLQPVPVTGQEXVQAYANLQQQQQQH
RRGRHVPPLGSNSVPLPAYALLPPHVGYYRPH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggccgagattgagaaaatgacagcagcggtggaccagccagacccagccccggtttca
gccgcagatccagtcccggttccagaaaccgtaaaaccaacaacaacaacatcggtggct
tcacccactgatatcccagtaaccgcaacggatactgtctcatcggaaactcctgaatta
ggcacatcgcccactcaggaaccatcgagcaattcccacccacatgactcggaatatgat
acggccagtgatctggagggcggcgaggagtacgacgatgacgacgatgatgatgaggat
gacgatggagaaagcggcagcgaggacgatacggaaaccgacgaagagacagaagaggat
gaggatggtgctggagagatgcccgatggtgacacatcttcagcagctgcagcggcggca
gcggctcaaaagaaagtagacgaggatcgcagcaatccgcagtatataccaaaacgtggc
acattctacgagcacgatgaccgcacagctgaaacagaggtgaacattgtcattgaagat
gacagtcagtcgcaatcgttaacagaaatcaatggggatgcgaatagtgttggcggtggc
gctgcacaatctgctgcgggtgagggagcgagcggagcaagtgttggtggtcaaacgccg
accatttcgcaggcttccaaaaccatgaagaaatggcaaccggcgtcaggtggcgatcgc
tggtcccacgatcgttttgaagcaaatgagcaggcgcccaaatcgcgggccgaacttttg
cagacctacggctatgatatacgcaacgaggatgctgcaccccgggctcgtcgccgccgg
cgatatgggcgcggtcctagtaagtattcacgtaactgggaggacgagcaggcctatctt
aaggccagcaataaagaacgaaaaccaccaaggcctcaggactttccagctcttaacgag
cgtaaagtctcgcgtagaccactcgccgcatccggtcgcgcggagaaggagaatcgtcgc
gggggggtaggggcaggagcacctggtggttctcaggagcagcctcgtcattatggccgt
catagtaatggcagctcagctggccgtcagaatgccatggaatttaaacaaaaatcgaat
cgtgggccacacccacaacccagagagagggagcgagagagggatagggtggaccgtgat
caaccggtggagcaacataccaagccgacaactccccgagcaaatggtcaaactattcaa
aacaacgaaggacttcaggtacaaccaaacactaaccaacagcatcagcagcaaacccaa
actcagcagaggcaacagcccatccagcaacagcaacagcatcaaccacagcagcaattg
cctttgccaacgccaccgacacagaaccaaataccgccactgtccaccacaaatctttcg
cagcgattgcagcaagtgcagcaacgtaatgatcccagtcatgtgggcagcgtccaaatg
caggcgctggccactcagaatcaacagcagcagcaacaacaacaacaggtccacatgcag
cagcagagtcaatctgtggcccccaagcgatactccagtctgcgaagatcccagcaacag
caggaccaaatccaacaacagatacagatgcagcagcagcaacaacagcagcagcagcaa
tctcaaattattctacaggatcctcatatgctcatgcagattgcttatcagcagcaagaa
ctccaggcccaactgcagggcctacaattgggacctgctcccggaccggcaagcgtgcca
ccgcccgcagccaaacagccggcacagccaccagcagccgccgcctatgctccggctcag
ggggctccctattatgtaactggagcagaggcgggaccatatggcaacccagctgcagct
gcagctgccgctgctgcctacttgcccactacaccagctgccgttgcgtatgcccaggct
caagcacaatcagctcccgcccagccacaagcgccgccgcaggctcaagtggctgccaca
cagtcggcccaggcaccgccaccgtccatgaactatcatcagaactacaatacagtgggg
ggtaccacgtattttgtgccgccagcccagacaaccagtcgacctactcagctgcctcaa
cgacgcccaaccaatgcgattcccattttgccaccatccgaaaagcataagtcacgagga
gccgcatctggtgccggatcgggaggaggccagcccaaagaggaaggaggcaactctgat
aatattgatcacattctggataatatgtttgtgcagcgtccggcattccaagcgccagcg
gattcagcagcaacatcatccaaggaggatacaaccaccactagcattaacaacgccgcc
actagcaatagtagcaccagctctggcgcgattcctgagcaaaaccttcagccagttcct
gttactgggcaggaatgagtgcaggcctatgccaacctacagcaacagcagcaacagcat
aggcgtggccgccatgtaccacccctagggagtaattcagtaccattgcccgcctatgcc
ctgctgccgccgcacgttggctactatcgaccgcactag
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