Drosophila willistoni: 6647460
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Entry
6647460 CDS
T01067
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dwi
Drosophila willistoni
Pathway
dwi03020
RNA polymerase
dwi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6647460
09124 Replication and repair
03420 Nucleotide excision repair
6647460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dwi03021
]
6647460
03400 DNA repair and recombination proteins [BR:
dwi03400
]
6647460
Enzymes [BR:
dwi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6647460
Transcription machinery [BR:
dwi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6647460
DNA repair and recombination proteins [BR:
dwi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6647460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
6647460
NCBI-ProteinID:
XP_002070673
UniProt:
B4N9I3
LinkDB
All DBs
Position
3R:complement(18347691..18351864)
Genome browser
AA seq
1176 aa
AA seq
DB search
MMYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGLDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaatgaagaagagctgtacgaggaggagaatgctgaagaaatttcgcac
gagctgtggcaggaggcttgctggattgttataaacgcatatttcgatgagaaaggtctt
gtgcggcagcaattggacagttttgatgagttcattcagatgtctgtacaacgtattgtt
gaagactcgccagccattgagctgcaagcagaggcacagcatacctcaggtgaggtggag
acgcctccaagattctcgctgaaattcgaacagatctacttgtccaagccgacacattgg
gaaaaggatggttcgccaagtcctatgatgccgaatgaggctcgtttgcgaaatctaacc
tactcagctcctttgtatgttgacatcacaaagacaaagaatgttgaaggcttggaccca
gtggaaacgcaacatcaaaaaacttttattggcaagattccgattatgttgaggtctacg
tattgcttactctctcagctcaccgatcgtgatttgacggagcttaacgagtgtcccctc
gatcctggcggctattttattatcaacggttcggaaaaagtgctcattgctcaggaaaag
atggctaccaatactgtgtatgtgtttagcatgaaggacggtaaatatgccttcaagaca
gaaatccgatcttgcttggaacacagttcacgtcccacttcaacactgtgggttaatatg
atggcgcgtggatcacagaatattaagaagtcggccattggacaaagaattatagctatt
ttgccatacatcaagcaagaaattccaattatgattgtatttcgtgctctgggttttgtg
gccgatcgtgatatattggagcatatcatatacgatttcgatgatcccgaaatgatggaa
atggtcaagccttcgctggatgaggctttcgtggtgcaagaacagaatgtggccctgaat
tttattggtgcccgaggagcacgtcccggtgtaaccaaagataagcgtattaaatatgcc
aaggaaattttgcaaaaggaaatgttaccccatgtgggcgtctccgatttctgtgagacc
aagaaagcatatttccttggatatatggtgcatcgtctactgctggcctctctgggtcgt
cgagagttggacgatcgagatcactacggtaataagcgcctggatctcgctggaccccta
ttggcctttttgttcagaggtctctttaagaatttaatgaaagaggttcgcatgtatacc
cagaagtttattgaccgcggcaaagacttcaatttggaactggccattaagacaaatatt
atcactgatggtcttagatactcattggccactggcaattggggagatcagaagaaggcc
catcaggccagagctggtgtctctcaggtgttgaatcgtttgaccttcgcctctacattg
tcgcatttgcgacgcgttaattcgcccattggacgtgatggtaaactggccaaacctcgc
cagctgcataacactctttggggcatgttatgccctgccgagactcctgaaggtgctgct
gtcggtcttgtaaagaacttggcactgatggcctatatttctgtgggctcacaaccgtca
cccattcttgagttcttggaagaatggtccatggaaaacttggaggaaatcgccccctcg
gccatagcagatgccacaaaaatctttgtaaatggctgctgggtgggtattcacagggat
cccgaacagttgatggccactttgcgtaaattgcgtcgccaaatggacattatagtctcg
gaagtatcaatgattcgtgatattcgagatcgtgagattcgtatatacacagatgccgga
cgtatctgtcgtcccttgctcattgtggagaatggttcgttgctgctgaagaagacccat
gtggaaatgttgaaagaacgcgactacaacaactacagctggcaggtgttggtggcatct
ggtgtggtggagtatattgacactttggaagaggaaaccgtaatgatagccatgtcgccg
tatgatttgaaacaggataaggattatgcgtattgtacaacttatacgcattgtgaaatc
catccagccatgattttgggtgtctgtgcttcgattataccatttcccgatcacaatcag
agtcctcgtaatacctatcaaagtgctatgggtaagcaagctatgggcgtttacataact
aatttccatgtgcggatggacacactggcccatgtgttgtattatcctatgaaacccttg
gtcacaacacgttctatggaatatctacgtttccgtgagttacccgctggcattaactca
attgtggctattctttgctacactggttacaatcaggaggattctgtcattttgaatgct
tcggcagtagagcgtggattcttccgttcggtgttctatcgttcttacaaggatgcagag
aacaagcgtgtgggcgatcaggaagagaactttgagaaaccacatcgtggcacttgtcag
ggtatgagaaatgcccattacgacaaattggatgatgatggcatcattgctcccggtatt
cgtgtatctggtgacgatgtggttattggcaagacaattaccttgcccgagaacgatgat
gaattggatagcaataccaaacgatttgccaagcgtgatgcctccacattcttgcgtaat
tcggaaacgggtattgtggatcaggttatgttgacactaaatagcgagggttataaattc
tgtaagattcgtgtgcgctctgtgcgtataccccagattggtgacaaattcgcctcacgt
catgggcagaagggaacctgcggaatacagtatcgacaggaggatatgccattcacatgt
gaaggattggcccctgatattattatcaatcctcatgccattccctctcgtatgacaatt
ggccatttaattgagtgcttgcagggcaaacttggctccaataagggagaaattggtgat
gctacgccattcaacgatgccgttaacgtgcaaaagatttccaccttcctgcaggaatac
ggctatcatttgcgtggcaatgaggtcatgtataatggtcacacaggacgcaaaattaac
gctcaggtctttttgggtcccacatactatcaacgtctcaagcatatggtggatgataag
attcattcacgtgctcgcggtcctgtacagattcttgtgcgtcagcctatggagggcaga
gcacgtgatggtggcttacgtttcggtgagatggagcgcgattgtcaaatctctcacggt
gcagcacaatttctgcgcgagcgtctgttcgaggtctccgatccatatcgggtacacatc
tgcaatttctgtgggctaattgccatcgccaatctgaggaacaacacttttgagtgcaag
ggctgcaagaacaagacacaaatctctcaagttcgtctgccctatgcggccaaattgctc
ttccaggagctcatgtccatgaatattgctccacggctgatggtcagctaa
DBGET
integrated database retrieval system
