Drosophila willistoni: 6649806
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Entry
6649806 CDS
T01067
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dwi
Drosophila willistoni
Pathway
dwi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6649806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6649806
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6649806
U7-dependent histone pre-mRNA processing factors
6649806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
DosC_2nd
Motif
Other DBs
NCBI-GeneID:
6649806
NCBI-ProteinID:
XP_002071979
UniProt:
B4NF98
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All DBs
Position
3R:complement(29600137..29602582)
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AA seq
757 aa
AA seq
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MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIRDLKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLSGCELERLQRPSLLITDAYNALYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHINLCHSLADVFKLPAGPKVVLASTPDMESGFTRDLFVQWAANPNNSIIFTTRT
SPGSLAMELVENAVPGRKIELDVRRRVELEGPELEEYLRTQGEKLNPLIIKPDVEEESSS
ESEDDIEMSVITGKHDIVVRPEGRHTSGFFKSNKRHHVMFPYHEEKIKYDEYGEIINLDD
YRIADLGGYDYLPAEEQNKENVKKEEPGGGQQDQQQHANGDMDTDVQLLEKPTKLINQRK
TIEVNAQIQRIDFEGRSDGESMLKILSQLRPRRVIVVHGTAEGTKAVARHCEQNVGARVF
TPNKGEIIDVTTEIHIYQVRLTEGLVSQLQFQKAKNAEVAWVDGRLGMRLKAIDGATNPT
EQEVSIQEGQTLTLETLEEDEIPVHNSVLINELKLSDFKQILMRNNINSEFSGGVLWCSN
NTLALRRIDAGKVSMEGCLSEDYYKIRELLYEQYAIV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgattataaagcttcacacaatttctggagccatggacgaatctccgccatgc
tacatactccagatagacgacgtgcgaatattgttggactgcggatgggatgaaaagttt
gatgcgaatttcatcagggatttaaaaagacaagtacatacattagatgccgtgctactg
tctcatccggatgcctatcatttgggggcactgccctatcttgtcggaaaattgggtctc
aattgtcctatctacgccacgatacctgtctttaaaatgggccaaatgtttatgtatgat
ctgtacatgtcgcattttaatatgggtgattttgatctattctcgctagatgatgtggac
acggcgtttgagaaaatcacccaattgaagtacaaccagacagtttcactgaagggcaag
ggttacggcatatcaataacgccgctgaatgctggccacatgattggtggtaccatttgg
aaaattgtcaaagtcggcgaggaggatatcgtctatgccacggactttaaccacaagaaa
gagcgtcatttgagcggctgtgaattggaacgcctgcaacgtccatcgctactgatcact
gatgcttataatgccctatatcagcaagcaagacgacgtgcccgtgatgagaagctgatg
accaatatcctacagactgtgagaaataatggcaacgttttgattgccgtagacacggcc
ggacgtgtcctggagctggcccacatgctggatcagctgtggaagaataaagaatcaggt
ctgatggcatactcgcttgcgttgcttaataacgtaagctataatgtgatcgagtttgca
aaatctcaaatcgagtggatgagcgataagctgacgaaggctttcgaaggtgcccgcaac
aatccgttccagttcaagcacattaatctatgccactctctggcagatgtatttaagcta
ccggctgggcccaaggtagtccttgccagtactccagatatggagagtggctttacgcga
gatctgtttgttcagtgggctgccaatcccaataatagtattatatttacaactcgcacc
tcacctggatctctggccatggagctcgtggagaatgcagtgcctggcaggaaaattgaa
cttgatgtgcgacgacgtgtggaattagaaggtcccgagctggaggaatatctacgtaca
cagggcgaaaagctgaatcctttgattattaagccagatgtggaagaggaaagcagctcc
gagtccgaggatgatatcgagatgagtgtgattacgggcaagcatgatattgtagttcgt
ccagaaggtcgtcatacatccggtttctttaaatccaacaagcgtcatcatgtaatgttt
ccctatcacgaggaaaagatcaaatatgatgaatatggcgaaataatcaatttggatgat
tatcgcattgccgaccttggcggctatgattacttgcccgcagaggaacaaaacaaagag
aacgtaaaaaaggaagaacctggaggcggtcagcaagaccagcagcaacatgccaatggt
gatatggacaccgatgtccaattgttagagaaacccactaagctgattaatcagcgtaaa
accattgaggttaatgcccaaatccagcgtattgatttcgagggacgttccgatggagaa
tcaatgctaaaaattctatctcagctcaggccacgtcgtgtgattgttgtccatggcaca
gccgaaggcaccaaagcggtggccaggcattgtgaacagaatgtgggcgcccgcgtcttt
acgccaaacaagggcgaaattatcgatgtaaccacagagatacacatttatcaggtgcgt
cttactgagggtctagtctcccagttgcaattccagaaggcaaagaacgcagaagtagcc
tgggtggatggacgcttgggcatgcgcttgaaagccatcgatggagccaccaatcccacc
gaacaggaggtatcaatacaagagggacaaactctcacactggagacgcttgaagaggat
gagatacccgtacacaattcggtcctgattaatgaattgaaactctcagactttaaacaa
atcctaatgcgcaacaacatcaattctgagttctccggaggcgttttatggtgcagcaat
aacacattggcgttgcgtcgtatcgacgccggaaaggtgtccatggagggttgtctgtcg
gaagattattacaaaatacgcgaactgttatatgagcaatatgcgatcgtttaa
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