Drosophila willistoni: 6651485
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Entry
6651485 CDS
T01067
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
dwi
Drosophila willistoni
Pathway
dwi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6651485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6651485
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6651485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF568
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
6651485
NCBI-ProteinID:
XP_002072670
UniProt:
B4NI06
LinkDB
All DBs
Position
3R:complement(2478429..2480797)
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AA seq
701 aa
AA seq
DB search
MATTDVLGLNKTEIFAKIRDGLPIVQESQNLLDCKDDLLFAWNSNDCSLLVKNWRASLME
ADTVPESTATKQKKITYQTLIPSSTLSLDVDRVVASNECSLVALSAPRGVCILDLPRRWG
PEGYFDGGKAIITCRTYNLDGQLFQSNPHLEVRQIRWHPNSVSDSMLLILFNNNTIRLYN
HYKLMHVWQVGPTIVRSGLRTSALDFGEAAVDFDIAPPVKSKRDLTEELEESVNLTDNSL
KQDKIEWPLVLLRENGNIYILMTEMSSDRTRLQGPITITPQKRDNYGLESSSIMVIPSLP
PTLVIGESSGKLHHALLLEAATPEHSLNEVDDFIVIEPSEYVIHVRETVELELGIKSGTS
KSNYKSPVYLKRDVINELRYFAYHNAGLHVVTVNFISELQRYLESEAEEDQLNFTTPSRA
EYILCTKFDSSDHINAVFGIALLQTPAGVVVLLGSGQVISLKLVVDAQLLVSPSEQTLTT
SSVEQGEAGQTFQDKIKSILQRSVNQPILADKPSSNANEGYELLSQAIVVLRSQYLKRHE
LVLVEFAKHINQIRIKRDQQLQEIQDLEDEREVISERAHKLAERFEEISDNQDWLVRKCH
RLLQNANTALPNSVVAEREFAQQVANINKANKKIAAALEDAKKTMNKQRYFIAKNQDEVR
QNAFELPEKQNRTITEILMQLASEIDRQVTDVKRINKIIGI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactgatgttttgggtctaaataaaactgagatatttgcaaaaatccgggat
ggcttgcccattgtgcaagaatcacagaatctcctggactgcaaggacgatcttcttttc
gcgtggaactccaatgactgctcattgctggtgaaaaattggcgcgcatctttgatggaa
gcagacacagtacctgaatcaactgcaacaaagcagaagaaaattacttaccagacgttg
ataccttctagtacgcttagtctggacgtggatcgtgtagtggcttccaatgagtgctca
ctggtggctttgagtgcgccacgtggtgtttgtatcctggacttgcctcgtcgctgggga
ccagaaggttactttgatggtggaaaggcgattatcacctgtcgcacatataatctggac
ggtcagctgtttcagagtaatcctcacttggaggtgcgtcagattcgctggcatcctaac
tccgtctccgactccatgctgctgattctgtttaacaacaacaccatccggctctacaat
cattacaagctgatgcatgtgtggcaagttggtcccaccatcgtgagatccgggctgaga
acctccgccttggattttggtgaggcagcagttgactttgatatagcaccgcctgtgaaa
tccaaaagagatttgacagaagaactagaagaaagtgtaaatttaacagataattctctt
aagcaggacaagattgagtggcctcttgtacttttgcgggaaaatggaaacatttatata
ctcatgactgaaatgagttcggacagaacccgcctccagggacccattacgataacccct
cagaaaagggacaactatggactggagtcgtcgtcaattatggtcatcccctctttgcca
cccactttggttattggcgagtcgagtggcaaactgcatcatgctcttttgctagaagca
gccactcccgagcattcgctcaatgaagttgatgattttatcgtcattgagccctccgaa
tatgtgatccatgtgagagagactgtggaattagagttgggaataaaatccggtacttcg
aaatcgaattacaagtcccctgtctacttaaaacgagatgttatcaatgaactgcggtac
tttgcatatcacaatgctggtcttcatgttgtcaccgtgaacttcatatccgaattgcag
cgttatctggagagtgaggcagaggaggaccagctgaattttacaacgccctcacgagct
gagtacatactgtgcactaaatttgattctagcgaccacatcaatgcagtttttggtatt
gctctactccaaactccggctggagttgttgttttgctggggagtggacaggtaattagc
ctcaagctggtcgtcgatgcccaactgttagtttcaccaagtgagcaaactctaacgaca
tcttctgtcgagcaaggagaggctggacaaacatttcaggacaagattaaaagtattttg
cagcgtagcgtcaatcagcccatattagctgataagccctcctccaacgccaacgagggt
tacgagttgcttagccaagccattgtcgtgctgcgttcacagtacctcaaacgtcatgaa
ctggtgcttgtcgagtttgctaagcacattaatcaaattcgcataaaaagagatcaacaa
ttgcaagagattcaggacctagaggacgagcgggaggtgattagtgagcgtgctcacaaa
cttgctgaacgttttgaggaaataagcgataatcaggattggcttgtccgcaaatgccat
agactcctacaaaatgccaatactgctctgccaaacagcgttgtggctgaacgtgaattc
gctcaacaggtggcaaacattaataaggctaacaaaaaaattgctgctgccttggaagat
gccaagaagaccatgaacaaacagcgttatttcatagccaaaaaccaagacgaggtccgt
caaaatgcattcgagttgccggagaaacaaaatcggaccataaccgagattctaatgcaa
ttggccagtgaaatagatcgacaggtcactgatgtgaagcgtataaataagattattggt
atttaa
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