Deinococcus wulumuqiensis: DVJ83_00050
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Entry
DVJ83_00050 CDS
T05579
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
dwu
Deinococcus wulumuqiensis
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwu03019
]
DVJ83_00050
03016 Transfer RNA biogenesis [BR:
dwu03016
]
DVJ83_00050
Enzymes [BR:
dwu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
DVJ83_00050
Messenger RNA biogenesis [BR:
dwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVJ83_00050
Transfer RNA biogenesis [BR:
dwu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DVJ83_00050
Prokaryotic type
DVJ83_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
DUF3530
DUF1180
Motif
Other DBs
NCBI-ProteinID:
AXG97833
UniProt:
A0A345IDR1
LinkDB
All DBs
Position
complement(7827..8285)
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AA seq
152 aa
AA seq
DB search
MSALRVPALLLSLLLPSCSAQTEAQGQATRSVPTQSAPVPAPRKSPPQPTRDPVSGLAYV
NVAQLPREGQQMLTLIGKGGPFRYSKDGVTFGNREGLLPRQARGYYREYTVKTPGESDRG
ARRIVCGGQPVTSTAECYYTADHYASFRRIRP
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccttcgcgttcccgcgctgctgctttcgctgctgctgccgtcctgctcggcc
cagaccgaggcccagggtcaggcgacccggagcgtgccgacccagagcgctcccgttccg
gcgccgcgcaagtcgcccccgcagccgacccgtgaccccgtcagcgggctggcgtatgtc
aacgtcgcgcagttgccgcgtgaaggccagcagatgctgaccctgatcggcaagggcggg
ccttttcgctacagcaaggacggcgtgaccttcggcaaccgtgagggcctcttgccccgg
caggcgcgggggtactaccgcgaatacacggtcaagacgcccggcgagagcgaccgggga
gcgcggcgtatcgtgtgcggcgggcaacccgtgaccagcaccgccgagtgctactacacc
gccgaccactacgccagtttcaggagaatccggccatga
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