Deinococcus wulumuqiensis: DVJ83_02480
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Entry
DVJ83_02480 CDS
T05579
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dwu
Deinococcus wulumuqiensis
Pathway
dwu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVJ83_02480 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwu03400
]
DVJ83_02480 (uvrA)
DNA repair and recombination proteins [BR:
dwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVJ83_02480 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVJ83_02480 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
AAA_23
nSTAND1
AAA_22
AAA_25
RsgA_GTPase
nSTAND3
AAA_15
AAA_33
NACHT
ATPase_2
cobW
NTPase_1
DnaJ_CXXCXGXG
ATPase
HUTI_composite_bact
BCA_ABC_TP_C
RNA12
T2SSE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AXG98210
UniProt:
A0A345IET8
LinkDB
All DBs
Position
475400..478483
Genome browser
AA seq
1027 aa
AA seq
DB search
MQPTQPHPSVPQLTVRGAREHNLKDITVSFPRDQFVVITGVSGSGKSTLAFDTIYAEGQR
RYVESLSAYARQFLGLMEKPDVDAITGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLL
YARVGTPYCPLCGRKIEKQSPTEITDRLLAGFPDKRAILLAPAVRGRKGEYRKLFADLKR
EGFSRVRVDGTLYEIEEAEKLKLEKFEKHDVDIVIDRLTLRESDRPRIAESVELGVRRGE
GLLRVLLPDGGEGGEAHEELYSEKFACPEHGSVLEELEPRSFSFNSPYGACGDCAGLGFK
QEFSPDRIIDEKLSIDDGAIIPWTKKGADAGIYYHDKLKALAAHLDFDLTTPWKNLPARA
QRAVLHGPGEAFPVVYKRGGKETMRFMTEFEGVVTNLERRYADTESEFMREKLEELMELR
PCPTCGGTRYKPEILAVRAGGLNISQVGGMSVLEADGFFRQLQDGELDHSAIQPFLKGHT
GGTAKAHGPLHYEYQLNTFGAAVAAPILRAIRTRLKFLVDVGLDYLSLDRTANTLSGGEA
QRIRLATQVGSGLTGVLYVLDEPSIGLHPKDNGRLIGTLKNLRDLGNTLLVVEHDEDTML
EADYLIDMGPGAGVHGGEVVASGTPEQVKAAKNSLTGKYLRGELKIEVPRERRGGNGKFL
KVFGARQNNLQNVDISIPLGTMTVVTGPSGSGKSTLIHDVLHATLARELNGAKTSPGLYD
RIEGMEHLDKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFN
VKGGRCEHCKGDGVMKIEMNFLPDIYVPCEVCKGARYNRETLEVKYNGKTIADVLDMTVE
DAQAFFEAIPAIERKMSLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELAKRATGKTIY
ILDEPTTGLHFEDVRKLMEVLQRLAEGGNTLVIIEHSLDVMKCADYVIDLGPEGGVRGGT
IVATGTPEQVAAHPTSYTGEYLRRVPGIVAAAPRAQAQKSEKARKPEKTDKPAKAPAKKG
KKVVSGA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccacccaaccccatccctctgtgccacagttgaccgtccggggcgcccgcgaa
cacaacctcaaggacattaccgtttcgtttccgcgtgaccagttcgtggtcatcacgggc
gtgtccgggtcgggcaagtccacgctcgccttcgacaccatctacgccgagggccagcgc
cgctacgtcgagagcctcagcgcctacgcccggcagtttctggggctgatggaaaagccc
gacgtggacgccatcaccgggctgtctccggccatttccatcgaccagaagaccacttct
cataacccgcgctcgacggtgggcaccgtcaccgagattcacgactacctgcggctgctc
tacgcccgcgtcggcacgccgtactgccccctgtgcgggcgcaaaatcgagaaacagagt
cccaccgaaatcaccgaccggctgctggcggggttcccggacaagcgggccattctcctc
gccccagcggtgcgcgggcgcaagggcgagtaccgcaagctgtttgccgaccttaagcgc
gagggcttttcgcgggtgcgggtggacggcaccctgtacgaaatcgaggaagccgaaaag
ctgaaactcgaaaagttcgagaaacacgacgtggacatcgtcatcgaccgcctgaccctg
cgggagagcgaccgcccccgcatcgccgaatcggtggaactcggggtgcgccggggcgag
gggctgctgcgcgtgctgctgcccgatgggggggagggcggcgaggcccacgaggagctg
tactcggaaaagttcgcctgccccgaacacggcagcgtgctggaagaactcgaaccgcgc
tccttttccttcaactcgccctacggcgcctgcggcgactgcgcggggctgggcttcaag
caggagttctcgccggaccgcatcatcgacgaaaagctcagcatcgacgacggcgccatc
atcccctggacgaaaaagggcgccgacgcgggcatctactaccacgacaagctcaaggcc
ctggccgcccacctcgacttcgacctcacgacgccctggaaaaacctgcctgcgcgggcg
caaagagccgtgctgcacggccccggcgaggcgttcccggtggtttataagcgcggcggc
aaggaaacgatgcgcttcatgaccgagttcgagggcgtcgtcaccaacctggagcgccgc
tacgccgacaccgagtccgagttcatgcgcgagaagctcgaggaactcatggaactgcgt
ccctgccccacctgcggcggcacccgctacaaacccgagattctggcggtgcgggcaggc
ggcctgaacatctcgcaggtgggcggcatgagcgtgctggaggccgacgggttcttccgg
cagcttcaggacggcgaactcgaccacagcgccattcagccgtttctgaaggggcatacc
ggcggcaccgcgaaggcgcacggcccgctgcactacgaatatcaactcaacaccttcggc
gcggcggtggcggcgcccatcctgagggcgattcgcacccggctgaagtttctggtggac
gtgggcctcgattacctctcgctcgaccgcactgccaacaccctctcgggcggcgaggcg
cagcgcatccggctggcgacgcaggtgggcagcgggctgaccggcgtgctgtacgtgctc
gacgaaccctccatcggcctgcaccccaaggacaacgggcgactcatcggcacgctgaaa
aacctgcgtgacctcggcaacaccctcctggtcgtcgaacacgacgaggacaccatgctg
gaggccgattacctcatcgacatggggccgggcgcgggcgtccacggcggcgaggtggtg
gcgtctggcaccccggagcaggtcaaggcggccaaaaactcgctgaccgggaaatacctg
cgcggcgaactgaaaatcgaggtgccgcgtgagcgccggggcggcaacggcaagttcctg
aaggtcttcggggcgcggcagaacaacctgcagaatgtggacatctccattccgctcggc
accatgaccgtcgtgaccgggccttcgggcagcggcaagtccaccctgattcacgacgtg
ctgcacgccacgctcgcccgcgaactcaacggcgccaagacctcgccggggctgtacgac
cgcattgagggcatggagcatctggacaaggtcatcgaaatcgaccagtcccccatcggg
cgcacgccgcgctccaacccggcgacctacacgggcgtctttaccgaaatccgcgacctg
ttcacccgcacccccgaagcgcggcgccggggctaccaggccgggaggttctccttcaac
gtcaagggggggcgctgcgaacactgcaagggcgacggcgtgatgaaaatcgagatgaac
ttcctgcccgacatctacgtgccctgcgaggtgtgcaagggagcgcggtacaaccgcgaa
acgctggaagtcaagtacaacggcaagacgattgccgacgtgctcgatatgacggtggaa
gacgcgcaggcgtttttcgaggcgattccggccatcgagcgcaagatgagcctgctgctc
gacgtgggcctgggctacatgaaaatcgggcagccgagcaccaccctctcgggcggtgag
gcgcagcgcatcaagctggcgaccgaactggcgaagcgggccaccggcaagacgatttac
atcctcgacgagccgaccaccggcctgcacttcgaggacgtgcgcaagctgatggaggtg
ctgcaacgcctcgcggagggcggcaacacgctggtcatcatcgagcacagcctcgacgtg
atgaagtgcgccgattacgtcatcgacctcggcccggaagggggcgtgcgcggcgggacc
atcgtggcgacgggcaccccggaacaggtcgccgcccaccccacgagctacaccggcgag
tacctgcgccgtgtgccgggcatcgtggccgccgcgccgagggcgcaggcacagaagtcc
gagaaggcaaggaagcccgagaagacggacaaacccgccaaagccccggcgaagaaaggg
aaaaaggtggtgtcgggagcctga
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