Deinococcus wulumuqiensis: DVJ83_04195
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Entry
DVJ83_04195 CDS
T05579
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dwu
Deinococcus wulumuqiensis
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwu03032
]
DVJ83_04195 (topA)
03400 DNA repair and recombination proteins [BR:
dwu03400
]
DVJ83_04195 (topA)
Enzymes [BR:
dwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DVJ83_04195 (topA)
DNA replication proteins [BR:
dwu03032
]
Prokaryotic type
DNA Topoisomerases
DVJ83_04195 (topA)
DNA repair and recombination proteins [BR:
dwu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DVJ83_04195 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
MarR_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AXG98501
UniProt:
A0A345IFM9
LinkDB
All DBs
Position
837016..839940
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AA seq
974 aa
AA seq
DB search
MPKSSPSRTLVIVESPAKAKTIEKYLGQGYAVESSVGHIRDLPRSAADIPEKYKGQAWAR
LGLDVEHDFQPLYVVSPEKKQKVAQLRKLAAEADEIILATDDDREGESIAWHLYQELKPK
VPVKRMVFHEITREAIQAAIAAPRQIDRNLVEAQEARRAVDRLYGYEVSPVLWRKVAPKL
SAGRVQSVATRMLVERERERMRFVSATWWDVLVTAQAGEQTFPARLTEVQGERLAAGKDF
DPLTGGLKPGAGVRLLGEAEALSIAGGLKGQTLKVLSAEEKPFTSRPPAPFITSTLQQEG
SRKLRMSAQTTMRTAQRLYEGGYITYMRTDSTNLSSEAVNAARTQVKDMYGAAYLSPQPR
VYAKKSRNAQEAHEAIRPAGSTFRTPEGLRGELSGDEWRLYDLIWKRTVASQMADARGRS
LRVRLGGQTKGGVAVGLNASGRTIDFPGFLRAYVEGSDDPAAALEDRDTPLPPLKEGDAV
QAQDVKAEDHETQPPARFTEASLVQALEGAGIGRPSTYASIIGTIQDRGYALKKGTALVP
SWTAFATSALLEHHFGTLVDYDFTAKMEEDLDEIAGGRESRVPYLRRFYLGEDGQGMALR
PLVERQMGEIDARGIATITVPKLEGSGIEVRVGRYGPYMQRGEDKANLPEDMTPDELTLE
VAEELFSRPQGDRVLGEDPESGHPVLARAGRYGPYVTLGDENPPLRSASLFPGEKLEDLT
LDRALKLLTLPRLVGTSEGEEVWAHNGKFGPYLKRGGDSRSLATHEQLFTVTLPEAEAIF
QQPKFRGRGVAAAPLATYEYEGRTPILLKSGRFGPYLTDGEKNATLRKGEDVNTLDPQRA
RDILEERGKEPQKKPGKAGAKKATGTKAANNKAAGGKTGTRKAAAKPAAKPTPARKTASK
TAKSSPSKAAPLTWAQLKPFVGVLSDAERALVTATREQGRKVEEVAPELGLDVKKAKGMA
LQASKKLNQAARQG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatcttccccgtccagaacgctggtgatcgtcgagtcgcccgccaaagccaag
accatcgagaagtatctcgggcagggctacgccgtcgagtcttcggtgggccacatccgt
gacctgccgcgcagcgccgccgatatccccgaaaagtacaaggggcaggcctgggcgcgg
ctcgggctggacgtggaacacgactttcagccgctgtatgtggtgtcccccgagaagaaa
cagaaggtggcgcagctgcgcaagctcgctgccgaggccgacgagatcattctggcgacc
gacgacgaccgcgagggcgaaagcatcgcctggcacctgtatcaggaactcaagcccaag
gtgccggtcaagcgcatggtgtttcacgaaatcaccagggaagcgattcaggcggccatc
gccgcgccccggcaaattgaccgcaatctggtcgaggcgcaggaggcccgccgcgcggtg
gaccggctctacggctacgaggtcagcccggtgctgtggcgcaaggtcgcgcccaagctc
tcggcgggccgggtgcagtcggtggcgacccgaatgctggtcgagcgtgaacgcgagcgg
atgcgcttcgtgtcggcgacgtggtgggacgtgctggtcaccgctcaggcgggtgagcag
accttcccggcccgcctgactgaggtgcagggcgagcggctggcggcaggcaaggacttc
gacccgctgaccggagggctgaaacccggcgcgggggtgcgtctgctcggagaggccgag
gcgctgtccatcgccgggggactgaagggacagacgctcaaggtgctgtcagccgaggaa
aagcccttcacttcacggccccccgcgccttttattacgtccacactgcaacaggaaggc
agccgcaagctgaggatgtcggcgcagaccaccatgcgaacggcccagaggctgtacgag
ggcggctacatcacctacatgcgcaccgactccaccaacctgtcgagcgaggcggtcaac
gcggcccgcacccaggtcaaggacatgtacggcgccgcctacctctcgccgcagccacgc
gtctatgccaaaaagtccaggaacgcccaggaagcgcacgaagcgattcgtccggcgggc
agcaccttccgcacgcctgaggggctgcgcggcgaactgagtggcgacgagtggcggctc
tacgacctcatctggaaacgtacggtggcctcgcagatggccgacgcccggggccgcagc
ctgcgcgtgcgtctgggtgggcagacgaaaggcggcgtggctgtgggcctgaacgcctcg
ggccgcaccatcgactttcccggctttctgcgcgcctacgtggagggcagcgacgacccc
gccgccgcgcttgaggaccgcgacacgccgctgcccccgctgaaagagggcgacgcggtg
caggcgcaggacgtgaaggccgaggaccacgagacccagccccccgcccgcttcacggaa
gcgagtctggtgcaggccctcgagggggcgggcatcgggcggccctcgacctacgcgagc
atcatcgggaccattcaggaccggggctacgcgctgaaaaagggcacggcgctcgttccc
tcgtggacggcatttgccacctccgccctgctcgaacaccacttcggcacgctggtggac
tacgacttcaccgccaagatggaagaagacctcgacgaaatcgcgggcgggcgcgagagc
cgggtgccctacctgcggcgcttttacctcggcgaggatggccagggcatggcgctcagg
cccctggtcgagcggcagatgggcgaaatcgacgcgcggggcatcgccaccatcacggtg
cccaagctcgaaggcagcggtatcgaggtgcgggtggggcgctacgggccgtacatgcag
cgcggcgaggacaaggccaacctgcccgaggacatgacccccgacgaactgacgctggaa
gtggccgaggagctgttcagccgtccgcagggcgaccgggtgctgggcgaggatcccgaa
agcgggcatccggtgctggcgcgtgccgggcgctatggcccctacgtgacgctgggcgac
gagaacccgccgctgcgctcggccagcctgtttcccggtgagaagctcgaagacctgacg
ctggaccgggcgctgaagctcctcaccctgccgcgactcgtcggcaccagcgagggcgag
gaagtctgggcacataacggcaaattcgggccgtatctcaagcgggggggcgattcgcgc
agcctggcgacccacgagcaactgttcacggtcacgctgcccgaggccgaggcgatcttt
cagcagcccaagttccggggccggggcgtggccgccgcgccgctggcgacctacgaatac
gagggccgcacgccgattctgctcaagtcgggccgcttcgggccttacctgaccgacggc
gagaaaaacgccaccctccgcaagggcgaggacgtgaacaccctcgacccgcagcgggcg
cgcgacattctggaggagcgcggcaaggaaccccagaagaaaccgggcaaggcgggggcg
aaaaaggcgacggggaccaaggcggccaataataaagcagcgggcggaaaaaccgggacc
agaaaagcggcggccaaacctgcggcgaaacccaccccggcgaggaaaaccgccagcaaa
acggccaaatcctctccctctaaagccgcgcccctgacctgggcacagctcaagcccttc
gtgggcgtcctgagtgacgccgaacgtgctctggtcaccgccacccgcgaacagggccgc
aaggtggaggaagtcgcgccggagctggggctggacgtgaaaaaggccaagggcatggcg
ctccaggccagcaagaaactgaaccaggcggcgcgacagggctga
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