Deinococcus wulumuqiensis: DVJ83_10135
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Entry
DVJ83_10135 CDS
T05579
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dwu
Deinococcus wulumuqiensis
Pathway
dwu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVJ83_10135 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwu03019
]
DVJ83_10135 (rny)
Messenger RNA biogenesis [BR:
dwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVJ83_10135 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
Propep_M14
CbtA
Motif
Other DBs
NCBI-ProteinID:
AXG99432
UniProt:
A0A345IIB0
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Position
2023481..2025262
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AA seq
593 aa
AA seq
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MQMLYVMVGLLLGLIGGVLVQRAVGHRQQAEIDDRLQREAQAEAQQIRAEAQRQAREMHE
AAEQDRQDATRKMQDAARQVHDAERRLQDAERRTQEAERRWQDAAERDAVAAAHEARLDE
QREQVRALRAQLEAEREQAKADAAQQREALNADRQETRREREELGREIERLGRRAEQLDA
RSDKLDALEDRIGAGLRELQTQEQEVAERLRQADLRLYEVAQLSPEVAREQIMGQLDAEL
EEEKAIRVKAMTERASAEARRSARSIIAQAIQRSASETSAQLSVSVVPIPSDAMKGRLIG
REGRNIRAFEALTGVDLIIDDTPEAVILSSFNPVRREVARHVLDALVADGRIHPTRIEEM
VHKAQDDMKTFIHQQGEEAAIEAGVVGLKPGLVQLLGRMYFRTSYGQNVLKHSVQVAHLT
GIMADELGLDAALARRAGLMHDVGKSIDREIEGTHVEIGINLAKRFGEPSEVIDGIAHHH
DPENGETLYSVLVAAADAISAARPGARREELESYVRRLEQLEQIAVAFPGVQQAYAIQAG
REVRVIVQPEKVSDAQATLLAREIAGRVEQDMEYPGQVQVTVVRESRAVEVAR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgctgtatgtgatggtgggcctcctgctcggactgatcggtggggttctcgtg
cagcgggccgtcggccaccggcagcaggccgaaatcgacgaccgccttcagcgcgaagcc
caggcagaagcgcagcagatccgtgccgaggcccagcgccaggcgcgggagatgcacgaa
gccgccgagcaggaccggcaggacgccacccgcaagatgcaggacgcggctcggcaggtg
cacgacgccgagcgccgtcttcaagatgccgagcggcgcacccaggaggctgagcggcgc
tggcaggacgccgccgagcgtgacgccgtggccgccgcccacgaagcccgactcgacgag
cagcgcgagcaggtgcgtgccctgcgggcgcagctggaagccgagcgcgagcaggccaaa
gccgacgccgcgcagcagcgcgaggccctgaacgccgaccggcaggaaacccggcgcgaa
cgtgaggaactcgggcgcgaaatcgagcggctcgggcgacgtgccgagcagctcgacgcc
cgcagcgacaaactcgacgccctcgaagaccgcatcggggccggactgcgcgagttgcag
acccaggagcaggaggtggccgagcggctgcgtcaggccgacctgcggctctacgaggtc
gcgcagctctcgcccgaggtggcccgtgagcagatcatgggccagctcgacgccgaactg
gaggaagaaaaagccatccgggtcaaggcgatgaccgagcgggccagcgccgaagcccgg
cgcagcgcccgctccatcatcgcgcaggccattcagcgcagcgccagtgagaccagcgcc
cagctctcggtcagcgtggtcccgattcccagcgacgccatgaaaggccgcctgatcggg
cgcgagggccgcaacatccgcgccttcgaggccctgaccggcgtggacctcatcattgac
gacacccccgaagccgtgatcctgagcagcttcaacccggtgcggcgcgaggtcgcccgg
cacgtgctcgacgcgctggtggccgacgggcgcattcaccccacccgcatcgaggagatg
gtccacaaggcgcaggacgacatgaagaccttcatccaccagcagggcgaggaagccgcc
atcgaagcgggcgtggtgggcctcaaaccggggctggtgcagctgctcgggcggatgtac
ttccgcaccagctacggccagaacgtcctcaagcactcggtgcaggtcgcgcacctgacc
ggcatcatggcggacgaactcggcctcgacgccgctctcgcccgccgcgccgggctgatg
cacgacgtgggcaagagcatcgaccgcgaaatcgagggcacccacgtcgaaatcggcatc
aacctcgccaagcgtttcggtgaaccgtccgaggtcatcgacggcatcgcccaccaccac
gaccccgaaaacggcgaaacgctctactcggtgctggtggccgccgccgacgccatcagt
gccgcccggcccggggcgcggcgtgaagaactggagtcttacgtgcgccgcctggagcag
ctggagcagattgcggtggcctttcccggcgtgcagcaggcctacgcgattcaggccggg
cgcgaggtgcgcgtgatcgtgcagcccgaaaaggtcagcgacgcccaggccaccctgctc
gcccgcgagattgccggacgggtcgagcaggacatggaataccccggtcaggtgcaggtg
acggtggtgcgcgagagccgggcggtggaggtggcacggtag
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