Deinococcus wulumuqiensis: DVJ83_11175
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Entry
DVJ83_11175 CDS
T05579
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dwu
Deinococcus wulumuqiensis
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dwu03016
]
DVJ83_11175
Enzymes [BR:
dwu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DVJ83_11175
Transfer RNA biogenesis [BR:
dwu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DVJ83_11175
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AXG99596
UniProt:
A0A345IIS4
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All DBs
Position
2235225..2236610
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AA seq
461 aa
AA seq
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MTQPELTPAQRTEVELLARGRADKSRTLRDLGLPETPEAAHALLLRLGVWDEARTPYADR
LRAALSAVELPVPDFDPDEPRLDLTHLPTFAIDDEGNQDPDDAVGVEALEGGLTRLWVHV
ADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVQKAGLGLSETSPALSISLDLD
PDGNAEAVDVCLTRVRVQRLAYQEAQARLEAGEEPFVTLARLARASRLLREGEGALSIDL
PEVRVKADETGASVFPLPKPEMRTVVQECMTLAGWGTAIFADDNELPLPFATQDYPTREV
AGDTLPAMWARRKTLARTRFQPSPGPHHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAG
RDPLSSKVMAAHIAESQLNADATRQAERLSRRHHTLRFIAAQPERVWDAVVVDRRGAQAT
LLIPDLAFDVQVNTPAAPGTALQVQFADIDLPQMRVRARSV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccgaactcacccccgcccagcgcaccgaggtcgaactgctcgcccggggc
cgcgccgacaagagccgcaccctgcgtgacctgggcctccctgaaacccccgaggccgcc
cacgcgctgctgctgcggctgggggtctgggacgaggcccgcacgccctacgccgaccgc
ctgcgggccgccctcagcgcggtcgagctgccggtgcccgacttcgaccccgacgagccg
cgcctggacctgacgcacctgcccaccttcgccatcgacgacgagggcaaccaggacccc
gacgacgcggtgggggtggaagctctggaaggtggcctgacccggctgtgggtgcatgtg
gcggacgtggccgcgctggtggccccggacagcccgctcgacctcgaagcgcgggcacgg
ggcgccaccctctacctgcccgaccgcaccatcgggatgctgcccgacgaactggtgcag
aaggccggtttggggctgagcgaaacctcgcccgccctctcgatttccctcgacctcgac
ccggacggcaacgccgaggcggtagacgtgtgcctgacccgcgtccgggtgcagcgcctg
gcctaccaggaggcgcaggcccggctggaggcgggcgaggaacccttcgtgacgctcgcc
cgtctcgcccgggccagccgcctgctgcgcgagggcgagggggcgctgagcatcgacctg
cccgaagtgcgcgtgaaggccgacgagacgggcgcctccgtcttcccgctgcccaagccc
gagatgcgcacggtggtgcaggagtgcatgacgctggcgggctggggcaccgccattttt
gccgacgacaacgaactgccgctgcccttcgccacgcaggactacccgacccgtgaggtg
gcgggcgacaccctgcccgcgatgtgggcgcggcgcaagaccctggcccgcacccgcttt
cagccctcgccggggccacatcacgggatgggcctcgacctgtacgcccaggcgaccagc
cccatgcgccgttacctcgacctcgtggtgcatcagcaactccgcgctttcctggcgggc
cgcgaccccctgagcagcaaggtcatggccgcccacatcgccgagtcgcaactcaacgcc
gacgccacgcggcaggccgagcgcctcagccgccgccaccacaccctgcgctttatcgct
gctcagcccgagcgcgtgtgggacgcggtggtggtggaccgccggggggcgcaggccacg
ctgctgattcccgacctcgccttcgacgtgcaggtgaacacgcccgccgctcccggcacc
gcgctgcaggtgcaatttgccgatatcgacctgccgcaaatgcgggtgcgggcgcgcagc
gtctga
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