Deinococcus wulumuqiensis: DVJ83_12320
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Entry
DVJ83_12320 CDS
T05579
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dwu
Deinococcus wulumuqiensis
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dwu03009
]
DVJ83_12320
Enzymes [BR:
dwu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DVJ83_12320
Ribosome biogenesis [BR:
dwu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DVJ83_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_11
TRAM
Methyltransf_31
Methyltransf_12
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AXG99780
UniProt:
A0A345IJA8
LinkDB
All DBs
Position
2455627..2456874
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AA seq
415 aa
AA seq
DB search
MSDAPLTLEIEKLVAGGLGLARDERGVVLVRGALPGERVTADVRSGKGVRQGTVREVLRR
SPDRVDGPELPTADLAFASYAAQLGYKRAFVEEALSRIAKLQAPVGETVPSPEQWHYRNT
AQYLVTPQGLGYRERRGHSAQLFQGDPLVMEEIAAVVAKLDPERLDPAGEIAFRASRLTG
EVVAALIGTGEPRDFLRASDHLLDAGVVGVSLAQPAGRRFSAGVRLVAGESEIQESFGDV
QVSINATGFAQVNPAAAGLAYRRAAALAGRGEHAVDLYGGAGAIARHLAPQFRRVTVLDT
AAEALSRGRQDVARGAAQGAGEKNVTFRQGDASRLGDIGAEVLVVDPPRAGLDDEVRGEI
QDSTADRLVYVSCDPATWARDVGDLVRRGWKLGEVTPHDFYPQTSHVEIVSVLDR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcacctctcacgctggaaattgaaaaactcgttgccggggggctgggactt
gcccgcgacgaacgcggcgtggtgctggtgcgcggcgccctgcccggcgagcgcgtcacc
gccgacgtgcgcagcggcaaaggcgtgcgccagggcacggtgcgcgaggtcttgcgccgc
agccccgaccgggtggacggccccgagctgcccaccgccgaccttgccttcgcctcctac
gcggcgcagctcgggtacaagcgggcgttcgtggaagaagccctctcgcgcatcgccaag
cttcaggccccggtgggggagacggtgccgagtcccgagcagtggcactaccgcaacacg
gcgcagtacctcgtgacgccccagggcctgggctaccgcgagcgccggggccacagcgcc
cagctgtttcagggcgaccccctcgtgatggaagaaatcgccgccgtcgtcgccaaactc
gaccccgagcggctcgaccccgctggcgaaatcgcctttcgcgccagccgcctgaccgga
gaagtggtggcggcgctgatcggcaccggggagccgcgtgactttctgcgggccagtgac
cacctgctcgacgcgggcgtggtgggcgtgtcgctggcgcaaccggcgggccgccgcttc
agcgcgggcgtgcggcttgtggcgggcgaaagcgagattcaggagagcttcggcgacgtg
caggtcagcatcaacgccaccggcttcgcgcaggtcaacccggcggcggcggggctggcc
taccgccgggcggcggcgctggcaggccggggcgaacacgcggtggacctctacggcggc
gcgggcgcgattgcccggcacctcgcgccccagtttcgccgcgtgaccgtgctggacacc
gccgccgaggcgctgagccggggacggcaggacgtggcgcggggtgcggcgcagggggca
ggcgaaaagaacgtcaccttccggcagggcgacgcctcgcgcctgggtgacatcggcgcc
gaagtgctggtcgtggacccgccccgcgccggactggacgacgaggtgcggggcgagatt
caggacagcaccgccgaccgcctcgtgtacgtctcgtgcgacccggcgacctgggcgcgg
gacgtgggcgacctcgtgcgccggggctggaagctgggcgaggtcacgccgcacgacttt
tacccccagacctcgcacgtcgaaatcgtgagcgtgctggaccgctga
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