Deinococcus wulumuqiensis: DVJ83_12820
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Entry
DVJ83_12820 CDS
T05579
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dwu
Deinococcus wulumuqiensis
Pathway
dwu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVJ83_12820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwu03019
]
DVJ83_12820
Enzymes [BR:
dwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DVJ83_12820
Messenger RNA biogenesis [BR:
dwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVJ83_12820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
DUF364
Motif
Other DBs
NCBI-ProteinID:
AXG99860
UniProt:
A0A345IJI8
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All DBs
Position
2551048..2552640
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AA seq
530 aa
AA seq
DB search
MAFGESGDWEAEPIRTADRAPRQGRGQPGERNRSQAQPRNQNQPRSNESRSNEPRRQRQD
GSRSRPAQAEQPADTAPQPTMIRLADPGEWRKLLGERQPTPVQEKAIPELLAGRDVIATA
RTGSGKTLAFLIPAAARGIGVTGPTRGMAPEVLIVSPTRELAVQIRDVARELGMTAGRIT
GGITPAATAREASNKGVVSGTPGRLKDLIGKGELGLSHVKYVVLDEADELLSLGFLKDVE
WIVNQARAQARGGQIQVALASATFPEEVRGVAARVLRDPVRVDIEPPRSAETAPLRAGEV
VAAGEGRAEHIARDTTRDEVLEHAAAEIREALREPGGCVVVFCRTKALTKRRAEKLGQML
PGEEVVPLEGNMDQRKRERVMDKLRDGTARVLVATDIAGRGIDLPEVRLVIHADVATTSE
DHVHRSGRTARAGRGGRNLVFIIPEQRQRWAQVRRGLPAHLHPPKTAQEHLIDKDIQEKQ
GRGSGNGVDAPRQGGGRSDGQRSGGRPQGQGRSDSGRSSSGRGGPRGGRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcctttggcgaaagtggcgactgggaagccgaaccgattcgcacggcggaccgtgcc
ccgcgtcagggccggggccagccgggtgagcgcaaccgcagccaggcgcaaccccgcaat
cagaaccagccgcgcagcaacgagtcgcgcagcaacgagccgcgccgccagcgtcaggac
ggcagccgctcgcgcccggcgcaggccgaacagcccgccgacacggcgccgcaacccacc
atgattcggctggccgaccccggcgagtggcgcaagctgctcggggagcggcagccgacg
cccgtgcaggaaaaggccattcccgaactgctcgccgggcgcgacgtgatcgccaccgcc
cgcaccggcagcggcaagacgctggccttcctgattccggcggcggcgcggggcatcggc
gtgactggccccacgcgcggcatggcgcccgaagtcctcatcgtctcgcccacccgcgaa
ctcgccgtgcagattcgtgacgtggcccgcgaactcggcatgacggcggggcgcatcacc
gggggcatcacccccgccgccaccgcgcgtgaagcgagcaacaaaggggtggtcagcggc
acgccgggccgcctcaaagacctcatcggcaagggcgaactgggcctctcgcatgtcaag
tacgtggtgctggacgaggccgacgaacttctctcgctgggctttctgaaggacgtggag
tggatcgtgaaccaggcccgcgcccaggccaggggaggacagattcaggtggccctcgcc
tccgccacctttcccgaggaagtgcgcggcgtggcggcgcgggtgctgcgtgacccggtg
cgcgtggacatcgagccgccccgcagcgccgaaaccgctcccctcagggccggggaagtg
gtggccgctggcgagggccgcgccgaacatatcgcccgcgacaccacccgcgacgaggta
ctcgagcacgccgccgccgaaatccgcgaggcgctgcgcgagccgggcggctgcgtggtg
gtgttttgccgcaccaaggcactcaccaagcgccgcgccgagaaactggggcagatgctc
cccggcgaggaagtcgtgccgctcgaaggcaacatggaccagcgcaagcgtgagcgcgtc
atggacaaactgcgcgacggcaccgcccgcgtgctggtcgccaccgacatcgccgggcgc
ggcatcgacctgcccgaggtgcgcctcgtcatccacgccgatgtcgccaccacgtccgaa
gatcacgttcaccgttcgggccgcaccgcccgcgcgggccggggcgggcgcaacctcgtg
ttcatcatccccgagcagcgccagcgctgggcacaggtgcgccggggtcttcccgcccac
cttcacccgcccaaaaccgcgcaggaacacctgatcgacaaggacattcaggaaaaacag
ggccggggcagcggcaacggggtggacgccccgcgccagggcggaggccggagcgacggt
cagcggagcggcggacggccccagggccagggccgcagcgactcgggccgcagcagttcg
ggaaggggcgggcctcgcggcggacggcgctag
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