KEGG   Drosophila yakuba: Dyak_GE12153
Entry
Dyak_GE12153      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
dya  Drosophila yakuba
Pathway
dya03018  RNA degradation
dya03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dyak_GE12153
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dyak_GE12153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE12153
   03041 Spliceosome [BR:dya03041]
    Dyak_GE12153
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dyak_GE12153
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dyak_GE12153
Spliceosome [BR:dya03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dyak_GE12153
SSDB
Motif
Pfam: LSM SM-ATX Hfq
Other DBs
NCBI-ProteinID: EDW91328
UniProt: B4P9Z7
LinkDB
Position
2R
AA seq 79 aa
MSRKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRV
NT seq 240 nt   +upstreamnt  +downstreamnt
atgtcacgcaaagaggcgctgtcgcagttcatcaaccagatacacggtcgccccgttgcc
gtcaagctgaacaacggcgtggactaccgaggtgtactggcctgtctggatggctacatg
aacatctgcctggagcagacggaggaatacgtcaatggtcagttgaagaacaagtacggc
gacgccttcatccgcggcaacaacgtcctctacatttccacgcagaagcggagggtctga

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