KEGG   Drosophila yakuba: Dyak_GE12174
Entry
Dyak_GE12174      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
dya  Drosophila yakuba
Pathway
dya03013  Nucleocytoplasmic transport
dya03015  mRNA surveillance pathway
dya03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dyak_GE12174
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dyak_GE12174
   03015 mRNA surveillance pathway
    Dyak_GE12174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE12174
   03041 Spliceosome [BR:dya03041]
    Dyak_GE12174
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Dyak_GE12174
    TREX complex
     Dyak_GE12174
Spliceosome [BR:dya03041]
 Complex C
  Other components
   EJC/TREX
    Dyak_GE12174
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dyak_GE12174
SSDB
Motif
Pfam: RRM_1 FYTT
Other DBs
NCBI-ProteinID: EDW88201
UniProt: B4P2H1
LinkDB
Position
2L
AA seq 253 aa
MLNKMEMSLDDIIKLNLGFKNKVRRGQKEKVRKTTAEGGFKGIRRTRNATGFIQKTKFQQ
GRTFREPKRPTFLMVCNLDYGVNDDDIMELFNESGLVQQGLVHYDREGNSLGTAQLMCKY
RADAMKIIKQFHGVFLDGRRLKLHLIQKTRDFKRPDGESRSLQSGSLQSRPFKNHYYQPR
PFRPAAFKTLTFSPRPFERDGIQVDSSSYESLVSEPIFRAKSNGGTFRKSGLRNSNRNST
PHKNAYRNNDFIH
NT seq 762 nt   +upstreamnt  +downstreamnt
atgttaaataagatggaaatgagtctagacgacatcatcaagttgaaccttggttttaaa
aacaaagttcgtcgtggtcaaaaagaaaaagttcgtaaaactactgcagaaggcggcttc
aaaggtattcgaaggactcgcaacgcaactggattcatacagaagaccaagttccaacag
ggaagaacttttagggaaccaaaaagacccacttttctcatggtttgcaatttggactac
ggagtgaatgacgacgacatcatggagctcttcaacgaaagcggactggtgcagcaaggg
ttggtccactacgatcgcgagggcaactcattgggcaccgctcaattgatgtgtaaatat
cgcgccgatgccatgaagatcatcaagcagttccacggagtctttttggacggacgccga
ttgaagctacatctcatacaaaaaacacgcgatttcaaacgccctgatggtgaatctcgt
tcattgcagagtggatccttgcagtctcgtcctttcaagaatcattattaccagcctcgt
cctttcaggcctgctgccttcaagacactgacattctcgcctcgtccttttgagcgcgat
ggcatccaagtggattcttcgtcttacgaaagcctcgtatcagaacccatttttagggcc
aaatcgaatggagggaccttccgaaagtctggtttgcgtaacagcaatcgcaattcaact
ccacataagaatgcatacagaaataatgattttatccactaa

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