Drosophila yakuba: Dyak_GE12556
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Entry
Dyak_GE12556 CDS
T01068
Name
(GenBank) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dya
Drosophila yakuba
Pathway
dya03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dyak_GE12556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dya03019
]
Dyak_GE12556
03041 Spliceosome [BR:
dya03041
]
Dyak_GE12556
Messenger RNA biogenesis [BR:
dya03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Dyak_GE12556
Spliceosome [BR:
dya03041
]
Complex B
Other components
Prp19-related factors
Dyak_GE12556
Complex C
Dyak_GE12556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
Mad3_BUB1_I
TPR_15
TPR_8
TPR_12
RPN7
PPR
ARM_TT21_C
DHR-2_Lobe_A
ARM_TT21
TPR_9
TPR_10
Motif
Other DBs
NCBI-ProteinID:
EDW90590
UniProt:
B4P480
LinkDB
All DBs
Position
2R
Genome browser
AA seq
882 aa
AA seq
DB search
MVTKTSKSLNLEINFEEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPDNGVNLVYERALK
ELPGSYKIWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERALVFMHKMPRIWMDYGAFMTS
QCKVTRTRHVFDRALRALPITQHGRIWPLYLQFVRRFEMPETALRVYRRYLKLFPEDTEE
YVDYLQEADRLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVAANEAATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVTLYEDKPAEIISTYTEAVQTVQPKQAVGKLHTLWVEFAKFYEANGQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKIAYHDDTETVQARLH
RSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGMFLEEHNYFEEAYRAY
EKGISLFKWPNVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAK
LEEEHGLARHAMSVYDRATSAVKEEEMFDMYNIFVKKAAEIYGLPRTREIYEKAIESLPE
QNMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNTNNGAAADAGAGAGPDAMRLLEEKARQAAAEANQ
KPTEKAASNIMFVRGETQGGAKDKKDTVVNPDEIDIGDSDEDEEEDDDEENEMSNENQAS
AAATKTDEEGLVMKKLRFEQKAIPAKVFGSLKPSNQGDSDGE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaaaaacgagtaaatctctaaatttagagatcaattttgaagaggaggatgtg
ccgtatgaggaggaaatccttcggaacgcctattccgtgaaacattggctgcgttacatt
gaccacaaagcgaaagcgccggataatggtgttaacctggtctatgagcgagctcttaag
gagctccctggcagctataagatctggcacaattacctgagaacccgcaggaagcaggtg
cgcggcaagatacccacggatcccatgtacgaggaggtcaacagtgccttcgagcgcgca
cttgtgttcatgcacaaaatgccacgtatctggatggactacggtgccttcatgacctcc
caatgcaaggtgacccgcacccgccacgttttcgatcgggctctaagagctttgcccatc
acgcagcacggtagaatttggccactgtatctgcagtttgtgcgccgctttgaaatgccg
gaaacagcactacgagtctaccgacgatatctgaaactattccccgaggacactgaagag
tatgtggactacctacaggaagcggaccgcctggacgaagctgcacagcagctggcgcac
atcgtagacaacgaacacttcgtttccaagcacggcaaatcaaatcatcagctgtggaac
gaactgtgcgacctcatctcgaagaatccacacaaggtgcattccttaaacgtggacgcc
atcattcgcggcggactgcggcgctacaccgatcagttgggccacctgtggaactccctg
gcggattactatgtgcgttccggcttatttgatcgggctagagatatatacgaggaggcc
attcaaactgtgaccaccgtaagagatttcacacaagtctttgatgaatacgcacagttt
gaggaactctcgctgaacaaacgcatggagcaggtagcagccaatgaggcggccaccgag
gaggatgacatcgacgtcgaactgcgcctctcgcgcttcgaatacctcatggagcgccgt
ttgctgctgttaaatagcgtgctcctgcgccagaatccgcacaacgtgcacgagtggcac
aagcgggtgactctgtacgaggacaagcccgccgagatcatcagtacgtacacggaggcc
gtgcaaacagtgcagccgaaacaggcggttggaaagctgcataccctgtgggtggagttc
gccaagttctacgaggccaacggacaggtggaggatgctcgtgtggtcttcgaacgcggc
actgaggttgagtatgtcaaagtagaggatctggcggcggtgtggtgcgaatgggcagag
atggagctacgacagcagcagttcgaggcggcgctcaagctgatgcaaagggcgacggcc
atgccaaagcgaaagattgcctatcatgatgatacggagacggtgcaggcgcgccttcat
cgctccttgaaagtgtggtccatgtacgctgatttggaggagtcatttggcacctttaag
acctgcaaagccgtctacgagcggattatcgacctgaagatctgtacgccgcagatcatt
atcaattacggaatgttcctcgaggagcacaactactttgaagaagcctaccgagcctat
gagaagggcatctcgctgttcaagtggcccaatgtatacgacatctggaactcctaccta
accaaatttttggagcgttatggcggcacaaaactggagcgggccagggacctcttcgag
cagtgcctggatcaatgtcctcccgaacacgccaagtatttttacttactgtatgccaag
ttggaagaggagcacggtctcgcccggcatgccatgtcggtttatgatcgcgccacgtct
gctgttaaagaggaggagatgttcgacatgtacaacatatttgtaaagaaggcagccgaa
atctatggcttaccgcgtacccgcgagatctatgaaaaggccatcgaatcgctgcccgag
cagaatatgcgtcacatgtgtgtcaagttcgccgaattggaaaccaagttgggcgaagtg
gaccgagctagagccatctatgctcattgctcgcaggtttgtgatcctcgtatcaccgcg
gacttttggcaaacttggaaggagttcgaagtgcgtcacggcaacgaagacacaatgcgc
gaaatgctgcgcatcaagcgctccgtgcaggccacttacaatacgcaggtgaacatgatg
gccgcccaattcctgaacacaaacaacggtgcggcagcggatgccggagcaggagctgga
ccggatgccatgagattgctggaggagaaagctcgtcaggcggcagccgaggccaatcaa
aagcccaccgagaaggcggcctcaaatattatgtttgtgcgcggcgaaacgcagggaggt
gccaaggacaagaaggatacggtcgtcaatcctgatgaaattgacattggagacagcgac
gaagacgaggaggaggatgacgacgaggagaacgagatgtcgaacgagaaccaggccagt
gcagcggccacaaaaacggacgaggaaggcctcgtcatgaagaaactgcgcttcgagcaa
aaggccattccagccaaggtcttcggcagcctcaagccttcgaatcaaggcgactctgat
ggggagtaa
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