KEGG   Drosophila yakuba: Dyak_GE13166
Entry
Dyak_GE13166      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dya  Drosophila yakuba
Pathway
dya03018  RNA degradation
dya03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dyak_GE13166
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dyak_GE13166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE13166
   03041 Spliceosome [BR:dya03041]
    Dyak_GE13166
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dyak_GE13166
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dyak_GE13166
Spliceosome [BR:dya03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dyak_GE13166
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EDW90234
UniProt: B4P9A5
LinkDB
Position
2R
AA seq 110 aa
MADKKVGGNNDGKEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNT
VEYLRDSDEPYKLTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFITQ
NT seq 333 nt   +upstreamnt  +downstreamnt
atggcagataaaaaggtgggtggcaacaatgacggcaaggagaagcgacgaaaggagtcc
attctggacctctccaagtacctggagaaacagatccgcgtaaagttcgctggcggccgc
gaggcatccggaatcctcaagggctacgatgcgctgctaaatctggtgctggacaacacg
gtggagtatctgcgcgattcggatgagccctacaaactgaccgaggaacagacccgcagc
ttgggactggtcgtctgtcgcggcacagccctggtcctcatttgtccacaagacggagtg
gagagcatcgccaatccgtttataactcaatag

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