Drosophila yakuba: Dyak_GE14198
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Entry
Dyak_GE14198 CDS
T01068
Name
(GenBank) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dya
Drosophila yakuba
Pathway
dya03008
Ribosome biogenesis in eukaryotes
dya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dyak_GE14198
09123 Folding, sorting and degradation
03018 RNA degradation
Dyak_GE14198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dya03021
]
Dyak_GE14198
03019 Messenger RNA biogenesis [BR:
dya03019
]
Dyak_GE14198
03009 Ribosome biogenesis [BR:
dya03009
]
Dyak_GE14198
03016 Transfer RNA biogenesis [BR:
dya03016
]
Dyak_GE14198
Transcription machinery [BR:
dya03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Dyak_GE14198
Messenger RNA biogenesis [BR:
dya03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
Dyak_GE14198
Ribosome biogenesis [BR:
dya03009
]
Eukaryotic type
Pre-60S particles
RNases
Dyak_GE14198
Transfer RNA biogenesis [BR:
dya03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
Dyak_GE14198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-ProteinID:
EDW87823
UniProt:
B4NZZ6
LinkDB
All DBs
Position
2L
Genome browser
AA seq
897 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECNENKKVDPDTGRNIYEDATLPNPNGIEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKETTEKRLEIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV
HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSASFKPDVPIGAE
VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
AVDRLVELYKKCVYKTKGYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKTRD
KCRKRQERNQDHGSLNQSSFGASAVGPNSQQKSVGNYKEEAAALRNRKRTGDQANLDDDD
EEDNDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCSSWNW
YFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPE
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVTRNKRGDN
YLYITNQSPHYKKVKKVSQKDDENVCKAISFDGMRGTLGQTKLNTAISGILKSPISGLSD
IHDNITVTTTFKDPEYDDDYIFEAKRLENAVDPPQVLPNEQSGNKYRPVIGFNSHLTRAY
VPDSGHRMLNAGIRNQQGGGGYGQGGGYGQGGGGNQGQGYQNNSRNYNYNYNNNYNQHQG
GGYQNNYNNRPQYGNNQRFNQDNSNQQRNYNNYNGPRNNNYQQQGGNRQQNQNYRRF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcattctttcgctggctgagccggaagtatccatccgtgataatcgag
tgcaatgaaaacaagaaggtggacccggacaccgggcgaaacatctacgaggacgccacc
ttgccgaatccgaatgggatagagtttgacaatctttacctggacatgaacggcatcatc
catccgtgcacgcatccggaggacaagccggcgccgaaaaacgaggacgaaatgatggtg
gcaatcttcgattgcatcgatcgtctattcggcatcgtgcgtccccggaaactgctctac
atggccatcgacggcgtggctccgcgggccaagatgaatcaacagcgatcgcgtcgcttc
cgagcggccaaggagaccacggaaaagcggctggagatagcgcgaatccgcgaggagctg
atgagccgcggctgcaaactgccaccggagaaggagaaaggagagcactttgattccaac
tgcatcacgccgggcaccccgttcatggacagactgagcaagtgcctgcactactttgtc
cacgatcggctgaacaacaacccggcctggaagggcatcaaggtgatcctgtcggacgcc
aatgtgcccggtgagggtgagcacaagataatggattacatccgcaagcagcgtgcccag
ccggatcacgatcccaacacgcagcacgtgctgtgtggagccgacgccgatctcatcatg
ttgggactggccacccacgagcccaacttcaccatcattcgggaggagtttctaccgaac
aagccgcgtccctgcgacatttgcaacggatttggccatgagatggacaagtgtgtcgga
ctaggagccactgcaccaaccagcgccagctttaagcccgatgttcccattggcgccgag
gtgaagttcatctttgtgcggctgagtgtgctgcgcgagtatctgaagcagactcttgaa
atgccgaatctgccatttgagtacagctttgagcgcgcgttggatgactgggtgtttatg
tgcttcttcgtgggcaacgattttttgccgcatctgcctagtctggagattcgcgagggt
gcagtggatcgcctggtggagttgtacaagaagtgcgtttataagacaaagggctatctt
accacgtcgggagatgtaaaccttgatcgggtgcagcttattatgaccgacttgggcaat
gcggaggaccagatcttcaagagccgacaacggcgagaggagcagttcaagaccagggac
aaatgtcgcaagaggcaggaacggaatcaggaccacggatccttgaatcaatcttcattt
ggcgccagcgccgtgggcccgaacagccagcagaaaagcgttggcaactacaaggaagag
gccgcggcccttcggaatagaaagcggacgggtgatcaagccaatttagatgacgatgat
gaggaggataacgacgaggtgcgattgtgggaggacggcttcaaggaccgctactacgag
tccaagtttgatgtggcaccgggaaaccagcagttccgctacgctgtagccttgcagtat
gtccgaggattgtgctgggttttgaagtactactaccagggctgttcctcatggaactgg
tacttcccataccattatgctccctttgcatcggacttcgtcaatatccagggcctgtcc
acggcgttcgaaaagggcacaaagccatttaatccgctcgagcaactgatgggcgtcttt
ccggcagctagtagctcgcacgtgcccgagccctgggcaaagctcatgtccgacccggag
tcaccgatcattgacttttatccggaagactttaagatcgatctgaatggcaaaaagttc
gcctggcagggagtggccctactgcccttcgtcgatgagaagcgtctgttcaaggctttg
gttccctactatgaccaactcactggagaggaggtgacgcgtaacaagcgtggtgacaat
tacctgtacattaccaaccagagtccgcactacaaaaaggtcaagaaagtaagccagaag
gatgacgagaacgtttgcaaagccatctcatttgacggtatgcgcggcactttgggacaa
accaagctcaacactgccatcagcggcattctgaagtcgccgatttccgggctatcggac
atccatgacaacataaccgtgacgaccacgttcaaggatccggaatacgatgatgactac
atatttgaagcgaagcggctggaaaacgccgtagatccgccacaggtgctgccgaatgag
caatcgggtaacaagtatcgtcctgtcatcggttttaatagccatttgaccagggcctac
gttccggacagtgggcaccgcatgttgaacgctggaataaggaaccaacagggtggcggg
ggctacgggcaaggcggtggctacggccagggtggagggggaaaccaaggacagggctat
cagaacaatagccgaaactataactacaactacaacaataactataaccaacatcagggt
ggtggctatcaaaacaactacaataaccgaccgcaatatggcaacaatcagagattcaat
caggacaattcaaatcagcagcgcaactataacaactacaatggcccaaggaataacaat
tatcagcaacaaggcggcaacagacaacaaaaccagaattatagaagattttaa
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