KEGG   Drosophila yakuba: Dyak_GE17513
Entry
Dyak_GE17513      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K15180  negative elongation factor B
Organism
dya  Drosophila yakuba
Pathway
dya03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Dyak_GE17513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dya03021]
    Dyak_GE17513
Transcription machinery [BR:dya03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     Dyak_GE17513
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1
Other DBs
NCBI-ProteinID: EDX02354
UniProt: B4Q0T3
LinkDB
Position
X
AA seq 597 aa
MIMSTPAKNNNGTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLPSLRPMLPL
LDLHGVRRLDFHTSLMEELRDKLIAHINEMGQKEPRERDKKLKELLVKSFPVVRVKSLRP
VVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIRE
KEHILLDPLYTTNLNNLFFPPTPKVRRQGEVVQKGANMIGTSVKLYDMVLQFLRTLFLRT
RNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQGFLDN
IKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRMLALGL
SAWVMIDSQDFKEPKLDCQVVTKFLPALMSLMVDDQCRSLHAKLPPDERESALTTIEHSG
PAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFLHSL
IALLIPMSEEFATEDFCTTLFDEFIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMK
AMQPTTAHNEHIHKLYETLQERIGTGAAETPVIEAPPMEFDSPLKSVPTPGPHYNVQ
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgataatgagcacaccggcgaaaaataacaatggaactggactggaggacgtgaatata
ccaggtcaggcctacttgcgcgaagccctgacctcctgcactgatcccttgaaggccatc
gagagtttccagcttgagaatggtgtactgttgccttcattgcgccccatgttgccttta
ctcgatttgcacggtgtgcgccgcctggacttccatacctcgctgatggaggagctgcgc
gacaagctgatagctcacatcaacgagatgggccaaaaggagccccgggagcgggacaag
aagctgaaggagctgctcgttaagagcttccccgtcgttcgggtcaagtcactgcgtccc
gtggtcatggccatacttaggaatacccagcacatcgatgacaagtacctaaaaatcctc
gtgagggatcgtgaactgtatgcggacacggatacggaagttaagcggcagatatggcgt
gataatcaatcgctatttggtgacgaggtgtcacctctgctctcacaatatattcgcgag
aaggagcacatcctgttggatcctttgtataccaccaacctgaataatctgttcttcccc
ccaacgcccaaggtgcgaaggcagggtgaagtggtccaaaagggggccaacatgattggc
acaagtgtcaagctgtacgatatggtgctgcagttcctgcgcactctattcctgcgcacc
cgcaatgtccactattgcacactgcgtgcagagctactgatggccttacacgatctcgag
gtgcaggagatcatctctatagatccctgtcacaagttcacctggtgcttggacgcctgt
ataagggagaagaatgtggacattaaacgttcgcgggagctccagggatttctggacaac
atcaagcgcggccaggagcaggttttgggtgatctatccatgactttgtgcgatccgtat
gccatcaactttctggccacgtcggccatcaagatattgcatcacttgatcaacaacgag
ggcatgccgcgtgacaatcagatactcatcctgctgctgaggatgttggccttgggttta
agtgcctgggtgatgatcgattcgcaggactttaaggagcccaaactggactgccaggtg
gtcaccaagtttttgcccgccctcatgtccctaatggtagacgaccagtgccgcagcttg
cacgccaaactaccgccggacgagcgtgagtctgcgctgaccaccattgagcattcggga
ccagcgccggatgccgtggaggcgtacattcaggagagttccgtggccagcatattggcc
atgtactatacgctgcacacggcacgcctgaaggatcgcgttggtgtgctgcgcgttctg
gccattctgtccgcctgtaaggacgaccgcgcgtacgaggatcccttcctgcattctctg
attgccctactcatacccatgagcgaggagtttgccacggaggacttctgcaccacgctc
ttcgacgagttcatatttgccggactgacgcgcgagaatgtgacctcgcgtcacatgctg
aaactgctgtggtatgtgcacaataagctgcccgccggtcgtttggccacattgatgaag
gccatgcagccgacgacggcccacaacgagcacattcacaagttgtacgaaacgctgcag
gagaggatcggaaccggggcggcggagacgccggttattgaggcgccgcccatggaattc
gattcgccgcttaagagcgtgcccacgccaggaccgcactataatgtccaatag

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