KEGG   Drosophila yakuba: Dyak_GE18993
Entry
Dyak_GE18993      CDS       T01068                                 
Symbol
Dyak_Hel25E
Name
(GenBank) Hel25E
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
dya  Drosophila yakuba
Pathway
dya03013  Nucleocytoplasmic transport
dya03015  mRNA surveillance pathway
dya03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dyak_GE18993 (Dyak_Hel25E)
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dyak_GE18993 (Dyak_Hel25E)
   03015 mRNA surveillance pathway
    Dyak_GE18993 (Dyak_Hel25E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE18993 (Dyak_Hel25E)
   03041 Spliceosome [BR:dya03041]
    Dyak_GE18993 (Dyak_Hel25E)
Enzymes [BR:dya01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Dyak_GE18993 (Dyak_Hel25E)
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Dyak_GE18993 (Dyak_Hel25E)
Spliceosome [BR:dya03041]
 Complex C
  Other components
   EJC/TREX
    Dyak_GE18993 (Dyak_Hel25E)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dyak_GE18993 (Dyak_Hel25E)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Utp25_C P-loop_SecA
Other DBs
NCBI-ProteinID: EDW88920
UniProt: B4P055
LinkDB
Position
2L:13652581..13655407
AA seq 424 aa
MADNDDLLDYEDEEQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTR
ELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNK
KLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVAL
SQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTY
IEGR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccgataatgacgatcttttggactacgaggatgaggagcagaccgagaccactgcg
gttgagaaccaggaggcgcccaagaaggatgtcaagggtacctacgtgtccatacacagt
tccggcttccgcgatttcctcctgaagccggagatcctgcgcgccatcgtggactgcggc
tttgagcatccctcggaggttcagcacgagtgcattccgcaggccgttctgggcatggac
atcctctgccaggccaagtccggcatgggcaagacggccgtctttgttttggccacgctg
cagcagctggagccgtcggacaacaacacctgccacgtcctggtcatgtgccacacccgc
gagctggccttccagatcagcaaggagtatgagcgattctccaagtacatgcccacagtc
aaggttgctgtcttcttcggaggaatggctattcaaaaggacgaggagaccctcaagagc
ggaaccccgcatattgtggtgggcacccctggccgaattctcgccttgattcgcaacaag
aaactcaatctgaagcatttgaagcactttgttctggacgagtgcgacaagatgctggag
cagctggatatgcgtcgtgacgttcaagagattttccgtagcacgccgcacggcaagcaa
gtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaagttcatg
caagatcccatggaggtctacgtcgacgatgaggccaagcttacgctgcatggactgcag
cagcactacgtcaatctgaaggagaacgagaagaacaagaagctgttcgaactgctcgac
gtgctcgagttcaatcaggtggttatctttgtgaagtcggtgcaacgttgtgtggctctg
tcccagctgctgacggagcagaacttccccgccatcggtatccatcgcggcatgacccag
gaggagcgtctgaaccgctaccagcagttcaaggacttccagaagcgcattttggtggcc
accaatctctttggccgcggcatggacattgagcgtgtgaacattgtgttcaactacgac
atgcccgaggattccgacacctacttgcatcgcgtggcccgtgccggtcgtttcggtacc
aagggactggcgatcaccttcgtttcggacgagaacgacgccaagatacttaacgaagta
caggatcgtttcgatgtgaacatcagcgagctaccggaggaaatcgatctctctacatat
attgagggacgctag

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