Drosophila yakuba: Dyak_GE19856
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Entry
Dyak_GE19856 CDS
T01068
Name
(GenBank) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
dya
Drosophila yakuba
Pathway
dya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dyak_GE19856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dya03400
]
Dyak_GE19856
DNA repair and recombination proteins [BR:
dya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dyak_GE19856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
EDW94848
UniProt:
B4PCD8
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All DBs
Position
3L
Genome browser
AA seq
1190 aa
AA seq
DB search
MSKKLNTSVGGTPTNTLFNYFSKSPAVDKKKLNPSAKTDPKESTTEKENLQNQQLKVKDA
KKEDSKPAAKRKLPISDDETGNGQRKRKRIVQPESESEPEMEETKSEDDFSDCASDYEPD
DNEASDDSGSSGEEEVSPSENDMSVDSPTPKKSRKKSKILNNNNNNEPTSKKVKLESPIQ
LAEGSTFQEKLKNLQSNAKKDASYDDIVTTTSNLDEPVVWPHQKLEFLQPDKIMDKQKRR
PDHPDYDKSTLHVPENFLNGLSPGVRQWWVLKSSNYDCVLFFKVGKFYELYHMDADVGVN
ELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTETPDMMTERCKRIKATKFD
KVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGTWSRYGVCFIDTSIGDFH
LGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQIVRTVLGGILKEQVPGNGNQAC
SAEKTLKLLAERYYAGNGADDNWPLVLRTMQSDMDHLGLTPNDNYKLALKALGQCIFFIH
KCKLEPKVLPMARYQLYVPPDQLEDAKPAVASTLRRSHMVLDATTLSNLRIIGEEHSLLS
TLDHCCTKFGKRLLHHWLCAPSCDVAVIKERQDAIGELMRMTSELQEVRALLAPMPDLER
NLAQIHLFGNKRIKQMDHPDSRAILFEEKIYNKQKLLGFMAVLKGFNALTKLPTMFHQCE
TALLRRITQLPESEGTFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG
EIEKRLKSYLEEQERHFGCRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPCR
RYTTAETRALLKDMQHAEETRNTVLKDLARRLFEKFSNYYDQWKQCIDCVANLDVLCSLA
EYAGQQMVICVPELVSGTEQPFIQLEEGYHPCVNASTYIPNGLELGTASEAPLSLLTGPN
MGGKSTLMREVGLLVIMAQIGAHIPATTCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE
TSLILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFH
DDKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRA
YELSKKVEAIALQRKITTKIVAATAGNEDSKKEKLTALKDLLKQLKMCQV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagttgaacaccagcgtgggcggaacgcccacaaacacgctatttaattac
ttttccaaatcgccggctgtcgacaaaaagaaattgaatcccagcgcgaaaacggatccg
aaagaatccacgaccgaaaaggagaatctccagaaccagcagctgaaggtaaaggatgca
aagaaagaggattccaagccggctgccaagaggaagttgcccatttccgacgatgagaca
ggcaatgggcaacgcaagcggaagcgcatcgttcagccggaatcggaaagtgaaccggaa
atggaggagaccaagtcggaggacgacttctccgattgcgcctccgactatgagccggat
gataatgaagccagcgatgatagcggcagcagcggcgaggaggaggtgtcgcccagcgag
aacgacatgtcagtggacagtccgactccgaaaaaatcgcgcaaaaagtcaaagatcctg
aacaacaacaataacaatgagccaacgagcaagaaggtcaagctagagtcacccatccag
ctggccgagggttcaacctttcaggagaagctgaagaacctgcagagcaatgccaagaag
gatgcttcctacgatgatatcgttaccaccacgtccaatctggatgagcccgttgtttgg
ccgcaccagaaactggagttcctccagccggacaagatcatggacaaacaaaaaaggcgt
ccagatcatccggactacgataagagcaccctgcacgtgccggagaacttcctcaatgga
ctgtcgccaggagttcgacaatggtgggtacttaagtcgtccaactacgactgcgtcttg
tttttcaaggtgggcaagttctatgaactgtatcacatggatgcggatgtgggcgtcaac
gagctgggcttcacttacatgcgcggcgagtttgctcactcgggtttcccggagatatcc
ttcgacaagatgtccaccatcctcatagacaggggcttcaaggtggctcgcgtggagcaa
acggaaaccccagatatgatgacggagcgctgcaagcggatcaaggccaccaagttcgac
aaagtggtggcccgcgagatctgccagattaccaatcgtggcacccaggtcttcggctca
cagtgcaagatcggaccgaatcatcagcccaactatatgctggccatagtggagcaggat
gagggaacttggagccggtacggagtgtgcttcatagacacctccattggggactttcat
ttgggcgagttcgaagacgacaagaactgttcccgcctgctcaccctcttgtcacatcat
atgcccgtgctgctactcaatgagaaatccgctttgagccagcgttctcagcaaattgtg
cgcactgtgctgggtggaatcctcaaggagcaggtgcccggcaacggaaatcaggcctgc
agtgccgagaaaaccctgaaacttctggcggaacgttactatgctggaaacggagccgat
gacaactggccattggtgctgcgcacaatgcagtcagatatggatcacttgggccttaca
cccaatgataattacaagctggcccttaaagctctcggccagtgcatcttctttatacac
aagtgcaagctggagcccaaggtgctgcccatggcgcgttatcagctatatgtgccgccc
gatcaactggaggatgccaagccggcggtggcctccaccctgagacgctcccacatggta
ctggatgccactacgttgtcgaacctcaggattatcggcgaggaacactccttgctctcc
actttggatcactgctgcaccaagttcggaaagcgactgctgcaccactggctttgcgct
ccgagctgcgatgtggcggtcatcaaggagcgacaggatgccattggcgagctaatgcga
atgaccagcgaactgcaggaagttcgcgctttgctagctccaatgccggatttggaacga
aatctggcccagattcacctatttggaaacaagcggataaagcagatggatcacccggat
tcccgggcgattctcttcgaggagaagatatataacaagcaaaagctactgggattcatg
gccgttctcaagggatttaacgccctcaccaagctgcctacgatgttccatcagtgcgaa
acagctttgctcaggaggattacccagctgccggaatctgaaggtacttttcccgacctt
agcaaggagctacaatattttgccactgcctttgaccatgatgcagctgctaaaacgggt
gtgattgcgcctcaagcgggaatggatgctgagtacgatgcggcaatggattccataggt
gagattgagaagcgcctgaaatcatatcttgaggagcaagagcgacactttggctgccgc
attacctacttcggaagcgacaagaagcgttaccagttggatgtgccggaaagccatgcc
agtaaggccaataaatcctattccttggaaggacagacaaagggaaagaaaccatgtcgt
cgctacaccactgctgaaacaagagctctgctgaaggacatgcagcacgctgaagagaca
aggaacactgtgctaaaagatctggcgcgtcgtctcttcgagaagttttcaaattattac
gaccagtggaagcaatgcatcgattgcgtcgccaacctggatgtcctgtgctcactagcc
gaatacgctggccaacagatggttatttgcgtgccagagttggtctctggtacggagcag
ccgtttatccaactggaggagggctaccacccttgcgtcaatgcatccacctatataccc
aatggcctggaattaggcaccgcatcggaggcgccactatccctgctcactggtcccaat
atgggcggcaaaagtacgctgatgcgggaagtgggactcctcgtaattatggcgcaaatt
ggcgcccacattcccgctactacctgtcgtctttcgttggtggacagaatattcacgcgc
ctaggtgctcaggatgacattcttgccgggcacagtaccttcctcgtggagcttaacgaa
acgtcactcattcttaagcatgccacttgccattcgcttgtgttgctcgacgaactcggc
aggggaaccgccacttatgatggcacagcgattgctgcctctgttgtgaacttcctggcc
aatctcaagtgtcgcactctgttctccacgcactatcacaatctgattgatttcttccac
gacgacaagagaatcacactgggtcacatggcctgcatggtggagaacgaagacaatgcg
gatcccacccaagaaacggtcacgttcctgtacaagtacacagccggtgcctgtcccaaa
tcgtatggctttaacgctgccaagctagctggaatgcctcagggaattataaagcgggcc
tatgagctttccaagaaagtcgaagccattgctctgcagcgcaagattacgaccaagatc
gtagctgccaccgccggaaacgaagactccaaaaaggagaaattaactgctctcaaggat
ttactaaagcagttaaaaatgtgccaagtttaa
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