KEGG   Drosophila yakuba: Dyak_GE21899
Entry
Dyak_GE21899      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
dya  Drosophila yakuba
Pathway
dya03018  RNA degradation
dya03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dyak_GE21899
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dyak_GE21899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE21899
   03041 Spliceosome [BR:dya03041]
    Dyak_GE21899
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dyak_GE21899
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dyak_GE21899
Spliceosome [BR:dya03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dyak_GE21899
 Complex C
  U2 snRNP components
    Dyak_GE21899
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-ProteinID: EDW94285
UniProt: B4PGC1
LinkDB
Position
3L
AA seq 95 aa
MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctcttttactccttcttcaagtcgctggtgggcaaggaagttgtggtggaactgaaa
aacgacctcagcatatgtggcacgctgcactcggtggaccagtacctgaacatcaagctg
acggacatcagtgtcacggacccggacaagtatccgcacatgctgagcgtcaagaactgc
ttcatccggggctccgtggtgcgctatgtgcagctgccgggcgacgaggtggacacccag
ttgctgcaggatgcggcacggaaggaggctgttgtgagcacgagataa

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