Drosophila yakuba: Dyak_GE23923 Help Entry Dyak_GE23923      CDS       T01068                                  Name (GenBank) uncharacterized protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism dya  Drosophila yakuba Pathway dya03018   RNA degradation Brite KEGG Orthology (KO) [BR:dya00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Dyak_GE23923  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dya03019]     Dyak_GE23923 Enzymes [BR:dya01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      Dyak_GE23923 Messenger RNA biogenesis [BR:dya03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      Dyak_GE23923   mRNA degradation factors    3'-5' decay     Ski complex      Dyak_GE23923 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT DEAD Ski2_N MTR4_beta-barrel Helicase_C DEXQc_Suv3 MTR4-like_stalk ATPase_2 RhopH3_C Motif Other DBs NCBI-ProteinID:  EDW98190 UniProt:  B4PNY0 LinkDB All DBs Position 3R Genome browser AA seq 1197 aa AA seqDB search MSEIRGEENLERLRNYILRPELSLHNPLPDVLPRKFDPLRLLHAPRCPASTKLIPRRDQS GQILEFVEVDLEDVGASANNSMSMQREPGLLEEATRGSHSNFPFWPGGFDEQRQQIAALD VENFQLGDKLLTVPPGFSSGYDFSQSQSVTLPPVIADPSNVDLLENLEQDLDVQEWMKLA RSEGTSSTGPPQNASQLNVQLPSEDFKDVDDHIMKADLKPVLNISTTTKNFKSDWAEMVD ISQPINDFKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIAL SKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLY CGSEVTRDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVG STKKRKVYVISTLKRPVPLTHFLYTGAGGKSRDDMFLLVDAQGKYLQGNYEKAVERKKEM QGKAKGGPTGSKNHINAKQEQYTWIGLIDFLKRNNKMPVVAFTLSRNRCDSNLAALQSVD LNTEKEKGAVQKFFLQCLAKLKPPDRTIPQVLILKDALQRGIGVHHSGILPILKEIVEML FQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHD ETGTAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMQFSF KEFNQKLQLPTQQKQLRLAEDKFAMLPNLGEHLQPLVNFYDKAVEYWKEKHRIMKFIVTQ AKIQKELKVGRVIVITQGKHYNKLAILLNTKSVTGKDTIYKVLVLDHQFKAKDSNSLQQS ELYYKILSLTPRNMTFQPEGIGGHTVLDIKAIDIINITKSTLKVDADAIIRNWEQRQLER FKDSPPGGSVVKAVTELNQLNESYIASADNIKYVNLSKEIVVSADSELAMLNYVDHLRRQ VGELLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSAKNLTLYPDYCNKLQVLRALKY IDELDEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIAALLSGLVFQAKLRDKPVI PEAMKKCVEAFEQINDTILAEEQRYQAAIESDNRLNFGLLEVVYEWARNKPFAEIMKLTT VQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLYTEL NT seq 3594 nt NT seq  +upstreamnt  +downstreamnt atgagtgagattaggggcgaggagaacctcgagcggctgcgcaattatatcctgcgtccg gagctgtccctccacaatcccctgccggatgttttgccccgcaaattcgatccgttgcgc ctgttgcatgcgccccgttgtccggcaagcaccaagctgattcctcgccgggatcagagt ggccagatactggagttcgtggaagttgacctggaggatgtgggcgccagtgccaacaac tcaatgtccatgcagcgggagccgggtctgctggaagaggcgacgcgtggctcccactcc aattttcccttttggcctggtggcttcgatgagcagcgccagcagatcgctgctctggat gtcgaaaactttcagctgggagacaagctgctaacggtgccaccgggctttagctctggc tacgatttctcccaatcacaatccgtaacactgccgcccgtgatcgccgatcccagtaac gtggatctattagagaacctcgagcaggatctggacgtccaggagtggatgaagctagcg cgcagtgagggaacaagctccaccggaccgcctcaaaacgccagccagttgaacgtgcaa cttccttcagaggatttcaaagatgtggacgatcacatcatgaaggctgacctgaagcca gtgctgaacatttctaccaccacgaagaacttcaagagcgactgggccgaaatggtggac attagccaacccatcaatgactttaaagagcagataccatgccccgccatggattttccc ttcgaactggatgtctttcaaaagcaggccattctcaagctggagcaacgccagtacgtt ttcgttgcagcccacacgtccgctggcaagactgttgtagctgaatatgccatcgcccta tccaagcgggatctcacacgcaccatctacacatcgccgatcaaggcgttgtccaatcag aagtaccgcgacttccgaaagaccttcaaggatgtgggccttatcacaggcgacctgcag attgagcccaccgcttcttgtctgatcatgaccaccgagattttacgctcaatgctgtat tgcggcagcgaagtcacccgggatctggagtgggtgatcttcgacgaggtgcactatatt aataacccagagagaggacatgtctgggaggaggtcatcatactgctgcccgaacatgtt aacattataatgctgagtgccaccgttcccaataccttggaattggcggactgggtggga agcacgaagaaaagaaaggtctatgtgatcagcactttaaaacggccagtgcctctgacg catttcctctatactggtgctggaggaaagagccgtgatgacatgtttctgctggtggac gcccagggaaagtatctgcagggtaactacgagaaggccgtggagcgcaagaaggagatg cagggcaaagcaaaaggcggcccaactgggtcaaagaaccacatcaatgccaagcaggag cagtacacctggattggtctaatcgactttctgaagcggaacaacaagatgccagtggtg gctttcactctgtcccgcaatcggtgtgactccaatttggccgctctgcagtcggtggat ctgaatacggaaaaggagaagggtgccgtgcagaagttcttcctgcagtgtctggccaag ctgaagccaccggaccgtactattccacaggttcttattcttaaggacgctttgcagcga ggaatcggggtgcatcacagcggcatcttgcccattcttaaggagatcgtggagatgctg tttcagaatgggctagtaaagctgctcttcgccaccgaaacgtttgccatgggtgtcaac atgcccgcacgcactgtggtctttgactcgtgcaaaaagtttgacggactggagatgcgt aacctgaaaccgggcgaatacatccaaatggccggcagagctggacggcgtggacacgac gagacgggtacggcgatcataatgtgcaagggcagtgtgccaccatcaatggagttgcgg cccatgatcctgggcctgccggagaagctgcagtcacagttcattctgcgctatgcggta atcctcacatgtctgcgcatcgagagcatcaaggtggaggatatcatgcagttcagcttc aaggagtttaaccagaagctgcagttgcctacgcagcagaagcaacttcgcctggccgaa gacaagttcgccatgctcccaaatctcggcgagcatctgcagccgctcgtcaacttttac gacaaagccgtcgagtattggaaggaaaagcaccgcatcatgaaatttattgtaacacaa gccaagatccagaaagaactgaaggttggccgcgtcattgtcattacgcagggcaagcac tacaataaactggccattctactcaacaccaagtctgtcacgggcaaggataccatctat aaggtgctagtgctggatcatcaattcaaggccaaggatagcaatagcctccagcaaagc gagctctactacaaaatactgtcgttgacgccgaggaacatgaccttccagcccgaggga atcgggggacacactgtgctggacatcaaggctatagacattatcaatatcaccaagagc acattgaaagtcgatgcagacgcgattatccggaattgggagcagcggcagctggagcgg ttcaaggattcgccgcctggtggatcggtagtcaaggccgtgaccgagctaaaccagcta aatgagagttacattgccagtgcggataacatcaaatacgtgaatctgtccaaggagata gtcgtgagtgctgacagcgagttggcaatgcttaactacgtagatcacctgagacgtcag gtgggtgaattgctgccccataccaacattgccggtttcgagcaagagtttgccaaagtt tacgagcgccgaatgctggagatccacattgaggaactgcgcttcaagaactctgctaag aatttgaccctctatccggactactgcaacaagctgcaggtgctgcgagcccttaaatac atagatgaactggacgaggttacgcttaagggaaaagttgcctgtgagatgggccaaaat gagctactaatcacggaactcattctatgcaacatgttcaacgatctggagccggcagaa atagccgccctgctctctggcctcgtctttcaggcaaagttgcgagataaacctgtaata ccagaggcgatgaaaaagtgcgtggaggcctttgagcagatcaatgatacaattctcgcc gaggagcagcgctaccaggcagccatcgagagcgataatcgccttaactttggcctgttg gaggtggtctacgagtgggctagaaataagccctttgctgagattatgaaactgaccacc gtgcaggagggcatcattgtacgatgcatccagcagctgaacgaaaccctgcgtgatgtt aaaacggctgccattcggattggcaatcctggactgcagtctaagatggaagaggcgtcg gcggctatcaagcgcgatattgtgttcaccgcatccttgtacacagaactgtag

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