Drosophila yakuba: Dyak_GE24605
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Entry
Dyak_GE24605 CDS
T01068
Name
(GenBank) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dya
Drosophila yakuba
Pathway
dya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dyak_GE24605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dya03019
]
Dyak_GE24605
Messenger RNA biogenesis [BR:
dya03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dyak_GE24605
mRNA degradation factors
5'-3' decay
Decapping complex
Dyak_GE24605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-ProteinID:
EDW96951
UniProt:
B4PM85
LinkDB
All DBs
Position
3R
Genome browser
AA seq
980 aa
AA seq
DB search
MDDSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGSAINGDWEEAHETMVRLGGNGERV
RKRPAESSGNTDFADHGNGAFLRHGNPLSSAPSSSGSTPAPLNAPFRQSRHIGDSDLELN
ISSMKLDDMDLSSFANDSEAGGLSNRIKLDSGVWGSQPFPNNQHLFREPMRSAFKPQQQQ
QQQQHQQHHPQQIKPPQEANANFALTPQAFPKITTLEDIERNMIIQQAIPKQQQQSQQQA
ERKMFDDFSLGNRQQVPTPTMLQQQILQQQQHQQKQQSQQQPPQQAQHMAPPGFLGTPQT
SPSRPTLGFPGPHPLPELLPTPPSQQQLNGIGGNRVPPGFIYPPGLPGNIPQLPQHPLIQ
QHMLPNFPLPGGNQRPLPNPLNPHALPTALNNFAMHPSFNAMRAAGLHPAAFMQPPHPHQ
MQPPRMPPHPLQAASSLLGQQPPSSMYNMFNMRLVQEIQQNHPLLQQAAVVRQMQQSRAG
SVTSDRQRTQTQQQQQGRRPDGTGNYPLEEYDEYANLMSTRDKHWLIGIQLSQLNTETPY
IDDYYYTVFRERKAQQNGQMRNSQAHKDNQLNHPLTQPRGHAQLILVQLGNKNGGRNGHG
RERRNSENANSTSGSTNNGSSGNNNNLTGYIFSPLKFENSLGKLQYGSVTAPRKIIDADI
MSGESNTAADANATSSSTSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLLKLEDLE
SPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQTMNPQLKNKFNYEVETK
AALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMPFIADQNIRWIVWSGVFCSLQTVVKKD
KDDVEGVLYALYPEFKKHVNKATFELIVSISSAITLNDKKLSGIFCSRFGILSLVALILR
AEEIYVSRNDATLSEENRQKWREFLAQVASCLNRTIQNQTISAAIESDAIQPLMNHFERF
KDLKLDALLALITEARHQID
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcttttttcggctttgacacaaatctaccggatgaagatggtggcgatgga
cgcatcgtcgaggcggaatacgatgccctcaatgacgaaacctttggatccgcgataaat
ggcgactgggaggaagcccatgagacgatggtgcgcctgggcgggaatggcgaaagggtg
cggaagcgacccgcggaatctagtggaaatacggattttgccgatcacggcaatggtgcc
ttcctgcgacacggtaatccgctttcatcggcgccttcttcaagtggctccactccggcc
ccattgaatgcccccttccgacagtctcggcacataggcgactcggatctggagctgaac
atttcctcaatgaagttggacgacatggacctgtcctcgtttgccaacgatagcgaagcc
ggtggcctgagcaaccgcatcaagctggactccggggtctggggatcacagccgtttccc
aacaaccaacatttgttccgtgagcctatgcgcagcgccttcaagccacagcagcagcaa
caacaacagcaacatcagcagcaccacccacaacagatcaagcccccacaggaagcgaat
gctaatttcgcactgactccacaggcttttcctaaaattacaacacttgaggacatagaa
cgcaatatgatcattcagcaggccattcccaaacaacagcagcagagtcagcaacaggcg
gaacgcaagatgttcgatgattttagtctgggtaacaggcagcaggtgcctacaccaacc
atgttgcagcaacagattttgcagcagcagcagcatcaacaaaaacaacagtcgcagcag
cagcccccacaacaagctcagcacatggcacctcctggcttcttgggcacgccacagacc
tcgccatcgaggccaactttgggttttcccggaccccatccactgcccgaactactgccc
acaccgccgtcgcagcaacagctgaacggcattggtggcaaccgagtgccgcccggattt
atttacccgccaggtctgcccgggaatattccgcaattaccccagcatccgctaatacag
cagcacatgctgccaaactttccactgcccggcggcaaccagcgacctctacccaatccg
ctcaatccgcacgctctgcccacggccctaaacaacttcgcgatgcatccgagcttcaat
gcgatgcgggccgctggactgcatccagccgcttttatgcaaccaccccatccgcaccag
atgcagcccccgcgaatgccgccgcacccgttgcaagctgcctcaagtctattaggtcaa
cagccaccgagctccatgtacaacatgttcaatatgcgactagtgcaagagattcagcag
aaccatccgctgcttcaacaggcagcagtcgtgcgccaaatgcaacaaagcagagccggt
tccgtgaccagcgatcgccagaggacgcagacgcaacagcagcaacaaggacgacgtcca
gatggtacagggaattacccgctggaagagtacgatgaatatgccaacctgatgagcacg
cgcgacaagcactggttaattggaatccagctctcgcagctgaacacagaaacgccgtat
atcgacgactactactacacggtgttcagggagcgcaaggcccaacagaatggacagatg
cgcaacagtcaggcgcacaaggataaccagctgaatcatccgcttacccagccacgcggc
catgcgcagcttattctcgtgcagttgggcaacaagaatggtggtcgcaatggacacgga
cgtgagcgccggaactcggagaacgccaacagcacgtcaggcagcacgaacaatggatca
agtggtaacaacaacaacctgacaggctatatattctcgcctcttaagtttgagaactca
ttgggaaagctgcagtatggaagtgtgacagcaccgcgaaaaattatcgatgctgacatt
atgagcggtgaatcaaatacagctgctgatgccaacgcaacttcttcatcaacgagctcg
actccgctgcccacctccgcgagccacgatgtaaatcccagcagcatgcgcaagtcgcgt
cacattctgcttttgattgaaacgctgtatcgttatctgctgaagctggaggatttggaa
agccccgaggtgatggccaccattgagctgaaaaagaaaaaggaagccgaacggatcgca
gcccttgagcagctagaaatggccaataaaactcccgaagagcgggctgccgaagccgcc
aatccgcaaaccatgaatccgcaactaaagaacaagttcaactatgaggttgagacgaaa
gctgcgttggtcaataaattaaaggcaggactggctttcgacaaggtgatcgccatgatg
aatgtgcgcaagggaaagatacttatccgacgcattatgccctttattgcggaccaaaac
attcgctggatcgtatggagcggagtcttctgttccctgcaaacagttgtgaaaaaggac
aaggacgacgttgaaggcgtcttgtacgctctttacccagagtttaaaaaacacgttaac
aaagccactttcgaactaatagtgagcatttcatctgctattacgctgaatgacaagaaa
ctgtctggaatcttctgcagtcgctttggaatcctttcgttggttgcccttatacttcgc
gccgaggaaatctacgtttcgcgaaatgacgctactctcagcgaggagaacaggcaaaaa
tggcgcgaatttctggcacaggtggcatcctgcctcaatcgcactattcaaaaccagacc
atctcggcagccattgagtcggatgcaattcagccgcttatgaaccattttgaacggttt
aaagatcttaaactagatgccctcttagcattaataactgaagccaggcatcaaattgat
tag
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