KEGG   Drosophila yakuba: Dyak_GE24605
Entry
Dyak_GE24605      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
dya  Drosophila yakuba
Pathway
dya03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dyak_GE24605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dya03019]
    Dyak_GE24605
Messenger RNA biogenesis [BR:dya03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dyak_GE24605
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     Dyak_GE24605
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-ProteinID: EDW96951
UniProt: B4PM85
LinkDB
Position
3R
AA seq 980 aa
MDDSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGSAINGDWEEAHETMVRLGGNGERV
RKRPAESSGNTDFADHGNGAFLRHGNPLSSAPSSSGSTPAPLNAPFRQSRHIGDSDLELN
ISSMKLDDMDLSSFANDSEAGGLSNRIKLDSGVWGSQPFPNNQHLFREPMRSAFKPQQQQ
QQQQHQQHHPQQIKPPQEANANFALTPQAFPKITTLEDIERNMIIQQAIPKQQQQSQQQA
ERKMFDDFSLGNRQQVPTPTMLQQQILQQQQHQQKQQSQQQPPQQAQHMAPPGFLGTPQT
SPSRPTLGFPGPHPLPELLPTPPSQQQLNGIGGNRVPPGFIYPPGLPGNIPQLPQHPLIQ
QHMLPNFPLPGGNQRPLPNPLNPHALPTALNNFAMHPSFNAMRAAGLHPAAFMQPPHPHQ
MQPPRMPPHPLQAASSLLGQQPPSSMYNMFNMRLVQEIQQNHPLLQQAAVVRQMQQSRAG
SVTSDRQRTQTQQQQQGRRPDGTGNYPLEEYDEYANLMSTRDKHWLIGIQLSQLNTETPY
IDDYYYTVFRERKAQQNGQMRNSQAHKDNQLNHPLTQPRGHAQLILVQLGNKNGGRNGHG
RERRNSENANSTSGSTNNGSSGNNNNLTGYIFSPLKFENSLGKLQYGSVTAPRKIIDADI
MSGESNTAADANATSSSTSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLLKLEDLE
SPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQTMNPQLKNKFNYEVETK
AALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMPFIADQNIRWIVWSGVFCSLQTVVKKD
KDDVEGVLYALYPEFKKHVNKATFELIVSISSAITLNDKKLSGIFCSRFGILSLVALILR
AEEIYVSRNDATLSEENRQKWREFLAQVASCLNRTIQNQTISAAIESDAIQPLMNHFERF
KDLKLDALLALITEARHQID
NT seq 2943 nt   +upstreamnt  +downstreamnt
atggatgactcttttttcggctttgacacaaatctaccggatgaagatggtggcgatgga
cgcatcgtcgaggcggaatacgatgccctcaatgacgaaacctttggatccgcgataaat
ggcgactgggaggaagcccatgagacgatggtgcgcctgggcgggaatggcgaaagggtg
cggaagcgacccgcggaatctagtggaaatacggattttgccgatcacggcaatggtgcc
ttcctgcgacacggtaatccgctttcatcggcgccttcttcaagtggctccactccggcc
ccattgaatgcccccttccgacagtctcggcacataggcgactcggatctggagctgaac
atttcctcaatgaagttggacgacatggacctgtcctcgtttgccaacgatagcgaagcc
ggtggcctgagcaaccgcatcaagctggactccggggtctggggatcacagccgtttccc
aacaaccaacatttgttccgtgagcctatgcgcagcgccttcaagccacagcagcagcaa
caacaacagcaacatcagcagcaccacccacaacagatcaagcccccacaggaagcgaat
gctaatttcgcactgactccacaggcttttcctaaaattacaacacttgaggacatagaa
cgcaatatgatcattcagcaggccattcccaaacaacagcagcagagtcagcaacaggcg
gaacgcaagatgttcgatgattttagtctgggtaacaggcagcaggtgcctacaccaacc
atgttgcagcaacagattttgcagcagcagcagcatcaacaaaaacaacagtcgcagcag
cagcccccacaacaagctcagcacatggcacctcctggcttcttgggcacgccacagacc
tcgccatcgaggccaactttgggttttcccggaccccatccactgcccgaactactgccc
acaccgccgtcgcagcaacagctgaacggcattggtggcaaccgagtgccgcccggattt
atttacccgccaggtctgcccgggaatattccgcaattaccccagcatccgctaatacag
cagcacatgctgccaaactttccactgcccggcggcaaccagcgacctctacccaatccg
ctcaatccgcacgctctgcccacggccctaaacaacttcgcgatgcatccgagcttcaat
gcgatgcgggccgctggactgcatccagccgcttttatgcaaccaccccatccgcaccag
atgcagcccccgcgaatgccgccgcacccgttgcaagctgcctcaagtctattaggtcaa
cagccaccgagctccatgtacaacatgttcaatatgcgactagtgcaagagattcagcag
aaccatccgctgcttcaacaggcagcagtcgtgcgccaaatgcaacaaagcagagccggt
tccgtgaccagcgatcgccagaggacgcagacgcaacagcagcaacaaggacgacgtcca
gatggtacagggaattacccgctggaagagtacgatgaatatgccaacctgatgagcacg
cgcgacaagcactggttaattggaatccagctctcgcagctgaacacagaaacgccgtat
atcgacgactactactacacggtgttcagggagcgcaaggcccaacagaatggacagatg
cgcaacagtcaggcgcacaaggataaccagctgaatcatccgcttacccagccacgcggc
catgcgcagcttattctcgtgcagttgggcaacaagaatggtggtcgcaatggacacgga
cgtgagcgccggaactcggagaacgccaacagcacgtcaggcagcacgaacaatggatca
agtggtaacaacaacaacctgacaggctatatattctcgcctcttaagtttgagaactca
ttgggaaagctgcagtatggaagtgtgacagcaccgcgaaaaattatcgatgctgacatt
atgagcggtgaatcaaatacagctgctgatgccaacgcaacttcttcatcaacgagctcg
actccgctgcccacctccgcgagccacgatgtaaatcccagcagcatgcgcaagtcgcgt
cacattctgcttttgattgaaacgctgtatcgttatctgctgaagctggaggatttggaa
agccccgaggtgatggccaccattgagctgaaaaagaaaaaggaagccgaacggatcgca
gcccttgagcagctagaaatggccaataaaactcccgaagagcgggctgccgaagccgcc
aatccgcaaaccatgaatccgcaactaaagaacaagttcaactatgaggttgagacgaaa
gctgcgttggtcaataaattaaaggcaggactggctttcgacaaggtgatcgccatgatg
aatgtgcgcaagggaaagatacttatccgacgcattatgccctttattgcggaccaaaac
attcgctggatcgtatggagcggagtcttctgttccctgcaaacagttgtgaaaaaggac
aaggacgacgttgaaggcgtcttgtacgctctttacccagagtttaaaaaacacgttaac
aaagccactttcgaactaatagtgagcatttcatctgctattacgctgaatgacaagaaa
ctgtctggaatcttctgcagtcgctttggaatcctttcgttggttgcccttatacttcgc
gccgaggaaatctacgtttcgcgaaatgacgctactctcagcgaggagaacaggcaaaaa
tggcgcgaatttctggcacaggtggcatcctgcctcaatcgcactattcaaaaccagacc
atctcggcagccattgagtcggatgcaattcagccgcttatgaaccattttgaacggttt
aaagatcttaaactagatgccctcttagcattaataactgaagccaggcatcaaattgat
tag

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