Dyadobacter chenhuakuii: NFI80_06615
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Entry
NFI80_06615 CDS
T08460
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc03030
DNA replication
dyc03430
Mismatch repair
dyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI80_06615 (holA)
03430 Mismatch repair
NFI80_06615 (holA)
03440 Homologous recombination
NFI80_06615 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dyc03032
]
NFI80_06615 (holA)
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_06615 (holA)
Enzymes [BR:
dyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI80_06615 (holA)
DNA replication proteins [BR:
dyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI80_06615 (holA)
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI80_06615 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Arnt_C
AAA_lid_RFC1
DUF8812
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
USJ32408
UniProt:
A0A9X1TRC4
LinkDB
All DBs
Position
complement(1571408..1572427)
Genome browser
AA seq
339 aa
AA seq
DB search
MAQTPDIVLKEIRSKKFRPIYFLHGDEPYHIDSIAEELEKRVVPESEKGFNQFVLYGKDT
DVAGVLSYARRFPFMAERQLILVKDANKLGGIEQKEQQARLEDYALNPLNSTVLVFCFHA
NADERKTFIKSINTNGVVVQSKKMYDNKLPEWVASFCQHEGVKISPKAVQMLVDNIGNDL
KRLSNEIRKILVNLRVDEGIDAAAIERFVGISKEYNVFEFQKALMTRDVMKANQIATYFS
QNSKDNPLAPILIILFGFYTKVLLAHASKDKSEKGLATELGVNPYFVKDYLLAIRNYPLP
KVANIIHYLRECDARLKGLDGVSIPEGELLKELVFKIVH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaacaccggacattgtcctgaaagagatcagaagtaagaagttcaggcctatt
tattttctgcacggcgatgagccttaccacatcgattccattgccgaagaactggaaaaa
cgtgttgttcctgaatctgaaaagggttttaatcaattcgttctgtatggaaaggatacg
gatgtggctggtgtgcttagctatgcccggcggtttcctttcatggccgaaaggcagctg
atcctcgtgaaagatgcaaataagctgggcgggatcgagcagaaggaacagcaggccagg
ttagaggattatgcactcaatccgctgaacagcacggtgctggttttttgttttcatgcc
aatgctgatgagcgtaagacattcatcaaatcaatcaatacgaatggagttgtggtgcag
tctaagaagatgtacgacaacaagttacccgaatgggtagcttcattttgtcagcatgag
ggcgtcaaaataagtcctaaggctgtgcagatgctggtcgataacattgggaacgatctg
aaacggttgtcgaacgagatccggaaaatcctggttaacctgcgcgtagatgagggaatt
gacgccgcagccattgaacggtttgtaggcatcagtaaagaatataatgtgtttgaattc
caaaaggcattgatgacgcgcgatgtcatgaaggccaaccagattgccacttatttttcc
caaaattcgaaggataatccgctggctcccatcctgatcattttgtttggtttttacaca
aaagtgctgctcgcacacgccagcaaagataaatcagagaaagggcttgctaccgaattg
ggtgttaacccttattttgtaaaagattacctgctggctatccgcaattatccgcttccc
aaagtggccaacattatacattatcttcgcgaatgtgatgcacggctgaaagggctcgac
ggcgtgagcattccggaaggtgaactgcttaaagaattggttttcaaaattgtacattaa
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