Dyadobacter chenhuakuii: NFI80_11830
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Entry
NFI80_11830 CDS
T08460
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc00300
Lysine biosynthesis
dyc00470
D-Amino acid metabolism
dyc01100
Metabolic pathways
dyc01110
Biosynthesis of secondary metabolites
dyc01120
Microbial metabolism in diverse environments
dyc01230
Biosynthesis of amino acids
Module
dyc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NFI80_11830 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NFI80_11830 (dapF)
Enzymes [BR:
dyc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NFI80_11830 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Big_11
Motif
Other DBs
NCBI-ProteinID:
USJ33413
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Position
complement(2857377..2858162)
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AA seq
261 aa
AA seq
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MNIAFFKYQGTGNDFVMIDDRSKTFPVSKELIASICHRRFGIGSDGLILLQNEPGYDFRM
VYFNADGGEGSMCGNGGRCVVRFAHDLGLFTDATTFIAVDGLHQATVTGDVISLKMSPVS
NVERYEEFDFMNTGSPHYVTYVDNVSETDVVNIGSEIRYGSVYGPKGGTNVNFIEVIEDN
HLSVRTYERGVEDETYSCGTGVTACALSAHLRNGFDGPITIETIGGTLKVDFEETPSGFD
NIHLIGPAVRVFEGVLDLPSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgctttttttaaatatcagggaacgggaaacgattttgtgatgattgacgat
cgaagcaaaacatttccggtttcgaaagagttgatcgcttctatctgtcaccgccggttc
ggcattggttccgatgggctgatcctgttgcagaatgagccgggctacgatttcagaatg
gtgtacttcaatgcggatgggggcgagggcagcatgtgcggcaatggcggacgctgtgtt
gtgcgcttcgcgcacgatttagggctttttacggatgcaacgacatttatagcagttgat
ggtttgcatcaggccacggttacgggtgatgtcattagcttgaaaatgtcgccggtgagc
aatgtggagcgttatgaagagtttgatttcatgaacaccggctcaccgcattatgtcact
tatgtagataatgtgtcggaaacggatgttgtgaatatcggcagtgagattcgctatggt
tcggtttatgggccgaaaggcggaacgaatgtgaattttattgaagtgatcgaggacaat
catttaagcgtcaggacctacgaacggggcgttgaggatgaaacttactcctgcggaacg
ggtgtaactgcatgtgcattatcggcgcatttacgcaacggctttgacgggccaattacc
attgaaacaattggcggcacattgaaagttgattttgaagaaacgccgtcaggatttgac
aacattcatttgatagggcccgcggttagggtttttgagggtgttttggacttgccaagc
ctgtaa
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