Dyadobacter chenhuakuii: NFI80_12575
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Entry
NFI80_12575 CDS
T08460
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc03030
DNA replication
dyc03430
Mismatch repair
dyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI80_12575
03430 Mismatch repair
NFI80_12575
03440 Homologous recombination
NFI80_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dyc03032
]
NFI80_12575
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_12575
Enzymes [BR:
dyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI80_12575
DNA replication proteins [BR:
dyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI80_12575
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI80_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_14
AAA_5
AAA_30
DNA_pol3_delta_C
Rad17
AAA_18
AAA_2
AAA_33
VapE-like_dom
AAA_7
AAA_19
RNA_helicase
Sigma54_activ_2
AAA_16
Mg_chelatase
AAA_assoc_2
nSTAND3
iSTAND
AAA_24
Matrilin_ccoil
Motif
Other DBs
NCBI-ProteinID:
USJ33577
UniProt:
A0ABY4XT62
LinkDB
All DBs
Position
3042065..3043831
Genome browser
AA seq
588 aa
AA seq
DB search
MDNFVVSARKYRPVTFDSVVGQSHITTTLKNAIRTNHLAQAFLFCGPRGVGKTTCARILA
KTINCQNLGDDVEACGECESCVSFQNNASFNIHELDAASNNSVEDIRNLIDQVRYPPQTG
KYKIYIIDEVHMLSQAAFNAFLKTLEEPPGYAIFILATTEKHKILPTILSRCQIFDFNRI
QPKDIAYHLSDIAQKEGIETEKEALELIGQKADGGLRDALSMFDLNVTFSTDNKLTYEAV
LENLHILDYDYYFKITDALTSGSIARSLVLFDEILRKGFDGHLFVVGLLEHFRNLLVCKD
PQTVTLLQVSESAERKYQQQSALADMSFLLSALSIASQCDINYKSAKNQRLHVELCLMKL
ANLPHVLQLSSLAAVDETAKKKVEPELKPLNTAPATPIETPSNGLSLNGNHTEAPARVAQ
PVAQAPSRLKNTIALSPTAAVAETAVKEKPSSEVENGYAASQTNVRKEALTFETLQTHWY
EFAEKRRIAGNSTTEEISLNKEFKLEGTSIEIALDNTHQLEAMANVRYELLTYLKSRIDA
PRLEINPRVAPQEVNRLPYTPAEKFNFMAEKNPYLLELKQALGLDVDF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggataatttcgttgtctcggccagaaagtatcgtcccgtcactttcgactcggtggtt
ggccagtcacacatcactacaactttaaaaaacgcaatccgcaccaatcacctggcgcag
gctttccttttttgcgggccgcgaggggttggaaaaacaacttgcgcaaggatcttagcc
aaaaccatcaactgccagaaccttggcgacgatgtggaagcgtgcggcgaatgcgaatct
tgtgtcagttttcaaaacaatgcatcattcaacattcatgagctggatgctgcttccaat
aactccgttgaagatatccgtaacctgatagaccaggttcgttacccgcctcaaaccggg
aaatacaaaatctatattattgatgaggtgcacatgctttcgcaagctgccttcaatgca
tttttgaaaacgttggaagaaccgcctggttacgccatttttatcctggcgaccacggaa
aagcataaaattctgccaaccattctttcacgctgccagatcttcgatttcaaccgcatt
caaccgaaagacattgcttatcacttgtcagatatcgcgcagaaagagggtatcgaaaca
gaaaaagaagcattggagctgatcggccagaaggctgatggcggtcttcgggatgcgctt
tcgatgtttgacctgaatgtgacattttcgacagataacaagcttacttatgaagctgtg
ctggaaaatctgcacattctggactacgattattatttcaaaatcacagatgcgctgact
tcgggcagcattgcccgctcgctggttttatttgatgaaattttgagaaaaggctttgac
ggtcatttgttcgtggttggccttttggaacattttcggaatctcctggtctgcaaggac
ccgcaaactgtcacgcttttgcaggtttcggaatcagcggaacggaaatatcagcagcag
tcggcattggcggatatgagctttttgttgtctgcgctgagcattgccagccagtgtgat
atcaattataaatcggccaaaaaccagcggttgcatgtggagctttgtttgatgaagctc
gccaatctgccccatgttcttcaactttcttctcttgccgccgttgatgaaacggcaaaa
aaaaaagttgagcctgagttaaaacctttaaatactgcccctgcaacgcccattgaaacg
cccagcaatggtttgtccttaaatggaaatcataccgaggctccggcgcgcgttgcacag
ccagttgcacaggccccttcgcgtctcaaaaatacgattgcattgagtcctacagcggcg
gttgcagagacagcagttaaagaaaagccaagtagtgaggtggagaatggctatgcggcc
tcgcaaaccaatgtaagaaaagaggcacttacattcgaaacgctgcaaacgcattggtat
gaattcgccgaaaagcgaaggatagcaggtaactccacgacggaagaaatcagtttgaac
aaagaattcaaactggaaggcacgagcattgaaatcgctttggacaacacgcaccagttg
gaagcaatggcgaatgtgcgttatgaactgctaacctatctcaaaagtcgcattgatgca
ccgaggctggaaataaacccgcgcgtggcgccgcaggaagtgaacaggcttccttacacc
ccggcagaaaaattcaatttcatggcggagaagaatccgtatctgctggaattgaaacaa
gctttgggattagatgtagatttctaa
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