Dyadobacter chenhuakuii: NFI80_15005
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Entry
NFI80_15005 CDS
T08460
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dyc
Dyadobacter chenhuakuii
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dyc03019
]
NFI80_15005
03009 Ribosome biogenesis [BR:
dyc03009
]
NFI80_15005
Messenger RNA biogenesis [BR:
dyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NFI80_15005
Ribosome biogenesis [BR:
dyc03009
]
Prokaryotic type
rRNA processing factors
NFI80_15005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
ATG17_like
RNase_E_G_Thio
PoNi_N
Motif
Other DBs
NCBI-ProteinID:
USJ29183
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All DBs
Position
3638976..3640538
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AA seq
520 aa
AA seq
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MSNELLINSTQKGERIALLQDKRLLEYHVETPDQSFTVGDIYLGTVRKLVAGLNAAFVDV
GFEKDAFLHYLDLGPNINSLNKLTKDVISKRQTSGKLNNFKMEPEIEKLGKIDKVLSKNQ
PILVQIVKEPISTKGPRLSCDISIAGRYIVLVPFSNSVNLSKKITDKAERNRLQRLMSSI
KPANFGVIIRTVATGKDVDELNKDLQDCLDKWENGIKALKDAKPRDRVIGEMNRASSIIR
DMLNESFDSITVDSKEVYDDIKAYIHNIAPDKENILKLHNGKNKIFEQFGLEKQIKSLFG
RSVSLPNGGYLIIEHTEALHVIDVNSGNKSNSEEDQEATALSVNLEAAKEIARQLRLRDM
GGIIVVDFIDMKKAENKRVLFDTMRDEMKGDRSKYTILPLSKFGLLQITRQRVRPEMNIV
TRETCPTCGGTGTIQASILVSDVIANNLDYILTKQNERGITISLHPFLHSYFTKGLISEQ
VKWLFHYKTWVKLIKDTSLGVVDFKFHNRYGEEIEIVPGN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattactaatcaattctactcaaaagggagaacgtatagcccttttgcag
gataaacgtcttttagaatatcacgtcgaaacaccggatcaaagctttaccgtgggggat
atttacctcggtacggtcaggaagctggtagcggggcttaatgccgcgtttgttgatgtc
ggttttgaaaaagatgcgtttctgcattatctagatcttgggccaaatatcaattccctc
aacaaactgaccaaggacgtaatatcgaagcgtcagacttcgggcaaattgaataacttc
aagatggagcccgaaatcgagaagcttggtaaaattgataaggtactttccaaaaaccag
cctattcttgttcagatcgttaaggagcctatttctacaaaaggtcccagactttcctgc
gacatttcgattgccggccgctatattgtgctggtgccgttttcaaattctgtaaacctt
tccaaaaagatcactgacaaagctgagcgcaaccgcctgcagcgtctgatgtcgtccatt
aagcctgccaacttcggtgtcattatccgcaccgttgcaactgggaaggatgtggatgag
ctgaataaagatttgcaggattgcctcgacaagtgggaaaacgggatcaaagcattgaaa
gatgccaagcctcgcgatagggttataggtgaaatgaaccgcgcttcttccatcatccgc
gacatgctgaatgaatcattcgacagcattacagttgattccaaagaggtctacgacgac
attaaggcttacattcacaacattgcgccggacaaggaaaacattctgaaactgcacaat
ggtaagaataaaatcttcgaacaatttggtcttgaaaagcagatcaaatcccttttcgga
cgttctgtaagtttgccgaatggcggttacctgattatagaacatactgaggcgctgcac
gttatcgacgtaaacagcggtaacaagtccaattcagaggaagatcaggaagcgactgca
ttgagcgtcaacctcgaagcagccaaagaaattgcccgtcagttgcggcttcgcgatatg
ggcgggattattgtggtcgattttatcgatatgaagaaggcggaaaacaaacgcgttctt
ttcgatacaatgcgcgacgaaatgaagggtgaccggtcgaaatacacgatcttgccgctt
tcaaaattcggtctgctgcaaattacccgtcagcgcgtacggcctgaaatgaacattgta
acccgcgaaacatgccctacttgcggcggaacgggcactattcaggcgagtattctggtt
tcggatgtaattgctaataacctggattacattctgaccaagcaaaatgagcgtggaatc
accatttcacttcatccattcctgcattcttattttacaaagggattaatctcagagcaa
gtaaagtggcttttccattacaaaacttgggtgaagctgatcaaagatacttcgctgggt
gtggtcgacttcaaattccacaaccgttacggcgaggaaattgagattgttccgggtaat
taa
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