Dyadobacter chenhuakuii: NFI80_19545
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Entry
NFI80_19545 CDS
T08460
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFI80_19545 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dyc03019
]
NFI80_19545 (recQ)
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_19545 (recQ)
Enzymes [BR:
dyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NFI80_19545 (recQ)
Messenger RNA biogenesis [BR:
dyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NFI80_19545 (recQ)
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NFI80_19545 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
ESCRT-II
Motif
Other DBs
NCBI-ProteinID:
USJ30053
LinkDB
All DBs
Position
complement(4699300..4701513)
Genome browser
AA seq
737 aa
AA seq
DB search
MVNNVDAVVLDTLKERLKEIFGYSQFRGEQEVIIQNILLGKNTFVIMPTGAGKSLCYQLP
ALVSDGLTIVISPLIALMKNQVDQLTAFGVNAQFLNSTLTKSEITRVKSDALDGSLKLLY
IAPESLTKEDNLDFLKKVKISFVAIDEAHCISEWGHDFRPEYRRIYGIIENIGNLPIIAL
TATATPKVQQDIRKNLQMEEAETFKSSFNRKNLYYEIRPKKDVKKQLIRYVRNNKGKSGI
VYCLSRKTVEEVAELLRVNDVRALPYHAGLDSNTRMANQDAFLNEEADVIVATIAFGMGI
DKPDVRFVIHYDVPKSLEGYYQETGRAGRDGLEGNCLMFYSYEDIQKLEKFNKDKTVTER
DNARHLLNEMVAYSTLGVCRRRQLLSYFGEYLEKDCGFCDNCIKSTEKTKVQDGVILVLR
AVQLTEQRFDCEHIADVLTATENQYVKSYEHDQLDVYGKGLEISESREYWISTIRQLVIF
NYLEKDVENYGVIKLGEKGANYLNDPYPVTLHKDHNFDEEEIKPEDDDKDAAAGGGSAHA
YDEALLGMLKALRKKVAKEKNLPPYVIFQDPSLEEMATTYPTTQQEMAQINGVGMGKVQK
FGRQFLDLITRYVEENEIETAKDVVIKSTVNKSKIKIFIIQQVDRKVSLDEIAEVKDLAL
ADVIEEVEHICYSGTKLNLDYYINQVIDRERQQDIYDYFMTAETDNIAAALGEFANDEIS
EEELRLMRIKFLSELAN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggtaaataatgttgatgccgtcgttttagacacgttaaaagaaagactaaaagaaatt
tttgggtacagtcaattccggggtgagcaagaagttatcattcaaaacatcctgcttggt
aagaatacttttgtaatcatgccaaccggagctggaaaatcgctttgctatcaattgcct
gctcttgtcagcgatggtctcaccatcgttatatcgccgcttattgcactaatgaagaat
caggtcgaccagttgactgcttttggcgttaatgcacagtttctcaactctacgcttacc
aaatctgaaattacgcgggtaaaaagtgatgcactggatggaagccttaaactgctatac
attgctcctgagtcacttacgaaagaagataacctggatttccttaaaaaagtaaagata
tcgtttgttgccattgatgaggcacattgtatttccgaatggggacacgatttccggccg
gaataccgccgtatttacgggattattgaaaacattggcaaccttcccattattgcgctt
acggccactgcaactccaaaagtgcagcaggacattcgtaaaaatctccaaatggaggag
gcggaaacattcaaatcttcatttaaccggaaaaatctttactacgaaatccgtccgaaa
aaggatgttaaaaaacagctgatccgctacgtccgcaacaataaaggcaaatcaggaatc
gtgtattgcctgagcagaaagacggtggaggaagtggctgaactgcttcgcgttaacgac
gttcgtgcattaccgtatcatgccggattggacagcaacacgcgcatggccaaccaggat
gcgtttctgaatgaagaggcggacgtgatcgtggcaaccatcgcattcggaatgggaatt
gacaagccggatgttcgttttgtgatacattatgacgttcccaagtcactggaaggttat
taccaggaaaccggccgcgcaggacgcgatggcctggaaggaaattgcctgatgttttac
agctatgaagacattcaaaagcttgaaaaattcaataaggataaaaccgtcacagaaagg
gataatgcacgccatttgctgaacgaaatggtggcatattccaccttgggcgtttgccgc
agaaggcagcttctgagctattttggtgaatatcttgaaaaagattgcggattctgtgat
aactgcatcaagtcaacggagaagacaaaggttcaggacggtgtaattctcgttctgaga
gccgttcagctgactgagcagcgattcgactgtgagcacattgcggacgtcctgacggct
actgaaaaccaatatgttaaaagctacgagcacgatcagcttgatgtgtatggcaagggg
ctagaaatcagcgaatcgagagaatactggatctcgaccattcgtcagcttgtaattttt
aattatctcgaaaaagacgttgaaaattatggggtgatcaaactgggtgaaaaaggtgca
aattacctgaacgatccctatccggttacgcttcataaagaccataattttgatgaggag
gaaataaaaccggaggatgatgacaaggatgcggctgccggaggcggaagtgcgcatgct
tatgatgaagcacttctgggaatgctgaaagcgctccggaaaaaggttgctaaggagaaa
aatctgcctccttacgttattttccaggatccgtcgctggaagaaatggcaacgacttat
ccgactacccagcaggaaatggcgcagatcaatggcgtcgggatgggtaaggtgcaaaaa
ttcggccgtcagttcctggacctgatcacccggtatgttgaagaaaatgagattgagact
gcgaaagatgtcgttattaagtcgactgtcaataaatctaaaatcaaaatattcataatc
cagcaagtcgaccgcaaggtaagcctggatgaaatcgcagaagttaaagacctggccctc
gcagatgttatcgaagaagttgaacatatctgctactccggaacaaagctgaatcttgat
tactatatcaatcaggtgattgaccgggaaagacagcaggatatatatgactatttcatg
actgctgaaacggacaatatagccgcagcattgggagaatttgccaatgacgagatcagc
gaagaggaattacggcttatgcgaatcaagtttttgtcggagctggcgaattaa
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