Dyadobacter chenhuakuii: NFI80_20400
Help
Entry
NFI80_20400 CDS
T08460
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dyc
Dyadobacter chenhuakuii
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_20400
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFI80_20400
Archaeal homologous recombinant proteins
NFI80_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
YhzD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
USJ30211
LinkDB
All DBs
Position
4882958..4886056
Genome browser
AA seq
1032 aa
AA seq
DB search
MIPIYLKIKGLYSYQTEQEIHFNALTDASLFGIFGAVGSGKSSILEAITFALYGDTERLN
SKGDDRTYNMMNLRSDELAIDFECIAGKNGDRYRFTVRGKRNSKNFKDVKTFDRRGYVWQ
DENWVPLPENENAETIIGLSYDNFRRTIIIPQGRFQEFIELRDADRTRMMKELFQLEKYD
LSRNVGSLTKQNDLAMSNVDGQLTGVGEVTGEMVAAEEKRRDEVRLEIQKVSEELRIQTE
LETAFQKLKLTAEKVRLLQTQLQTLEAERPVMLEREVMLKIFETCSIHFKSILDQKNTLN
AGIARDQKIVENNKIRLDELTKLAEKQQELLTRLQPQYEKREELLDTADELEKIIQIIDN
RVSAEKRKEALTRGNEQLKEKEASITRLTKQKQEKESENEQRKNALSDIQEISEIKAWFT
TCDALIEKRQSVKTEAETLQADITAQQQMLIAKIDDINAKFQLNLAENATLEAFQQSIQT
FLTHSEAETRDKNRELLSLHTKLALHRYAGAIVDGEPCPLCGSEHHPAVLHADHAVSENI
IVAEGVLATLAAQEKAIRTSQAPVERIYNQIDNLEKLKATIKQRWTDAKVQIEAHEKLFV
WNKFDKNDRAGFEKHFTEITKNQSEIKEADAAIKALSLKIETENLEKTEKIEKPLQSLKD
EILRFENTVLTLAGQLQKVNLREFEDQPKAAILEKITAFKSSYKEITSLFEKSEKDLDEV
QKEKDVLSGAQQTLKTTLDSSQRDLAELQITVEAQLRAFNFESDDQVKSILQKPIQIESE
RKAIETFKYALDTTSRDLDNLLKENTEQQYDPEQHETVIKAKETLTENLNAFRKEEGGLD
RLLKKMAEDLAKKAALLTEKARLQLRKEHLDDLTKLFRSSGFVDYASSIYLQNLIQAANH
RFHQMTHQQLHLELGEGNSFWVRDLLNGGHLRLLKTLSGGQKFQAALSLALALADHIHVR
NGSKHNFFFLDEGFGSLDKNALQTVFETLKSLRKENRIVGIISHVEDLQQEIQTYLSIQE
TEEGSRIMPSWK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatccctatttatctcaaaatcaaaggtctgtattcctaccagaccgagcaggaaatc
cattttaatgcgttaacggacgcatcattgttcgggatttttggcgcggtaggaagcgga
aaatcatccatacttgaagcaatcacattcgccttgtacggggacaccgagcggctcaat
agcaagggcgacgaccgcacgtacaacatgatgaacctccgttctgatgagttagccatt
gattttgaatgcattgcagggaaaaatggagatcgttaccgtttcaccgttcggggaaaa
cggaatagtaaaaatttcaaagacgtaaaaaccttcgaccgtcgcggctatgtgtggcag
gacgaaaactgggtgccgcttccggaaaatgagaatgcagaaacgatcattggcctgagc
tatgacaattttcggcgcacaatcattattccccagggccgtttccaggaattcatcgag
ctgcgcgacgccgaccggacgcggatgatgaaagagcttttccagctcgaaaaatatgat
ttgagccggaatgtaggttcattaaccaagcaaaatgacctcgccatgtccaatgtggac
ggccagctgacaggcgtaggcgaagtgacgggcgaaatggtggcagcggaagaaaagcgt
cgggacgaagtcaggcttgaaatccagaaagtaagcgaagaactacgcatccaaaccgaa
ctggaaacggcatttcaaaaactgaaattgaccgctgaaaaagttaggttgctgcaaacg
cagctgcaaacattagaagccgagcgtccggttatgctggaacgggaggtaatgttgaag
atcttcgaaacgtgctctattcatttcaaatccattttagatcaaaaaaatacattgaat
gcgggtattgcccgggatcagaaaatagttgaaaacaacaaaatacgcctggacgagctc
acaaagctggccgaaaaacaacaggagttactaacccgcctgcaaccgcaatacgaaaaa
cgtgaagaactgcttgatacggcggatgagctggagaagatcattcaaatcattgataac
agggtttctgcggaaaaaaggaaagaagcgttaacgcgtggaaatgagcaactgaaagaa
aaagaagcatccataacccgcttaaccaaacaaaagcaggaaaaggaatctgaaaatgag
caacgtaaaaatgccctttcggacattcaggaaatcagtgagatcaaggcctggttcacg
acttgcgatgcattaattgaaaagcggcaatccgtaaaaaccgaggcggaaacattgcag
gcggacattactgcccagcaacaaatgttaattgcgaaaatcgacgacattaatgccaaa
ttccagcttaatcttgctgaaaatgctacactagaagcttttcagcagtctatccaaaca
tttttaacccactcagaagcagaaacgagggataaaaaccgggagctgctttcgcttcat
accaaactcgcattgcatcgatatgcaggcgcgattgtggacggcgaaccttgtccactg
tgcggatcggagcatcatccggctgttttgcatgcggatcatgctgttagcgagaacatt
atagttgcggaaggcgtacttgcaacattagccgcgcaggaaaaagccatccgtacatcc
caggcgccggttgaaagaatttacaatcaaatcgacaatctcgaaaagctgaaagcgacc
attaagcagcgctggacggacgcaaaagtgcagattgaagcacatgagaagctttttgtt
tggaataaatttgataaaaatgatcgtgcgggttttgaaaagcattttacagagattact
aaaaatcagtctgaaataaaggaggcggacgcggcgattaaggctttgtctttgaaaatt
gaaacggagaatcttgaaaaaacggagaagattgagaagccgttgcaaagtttgaaagat
gaaatcctgcgctttgaaaacacagttctaacattggcaggccaacttcaaaaggtcaat
ttgcgcgaatttgaagatcaaccgaaagcagcaattttagaaaaaattacagccttcaaa
agcagttataaagaaattaccagcctgtttgaaaaatcagaaaaggatcttgatgaagtg
cagaaagaaaaagatgtgctctccggtgcccagcagacattaaaaacaacattggattcc
agtcagcgcgacctcgctgaattgcaaatcactgtggaggcgcagttaagagcattcaat
tttgaatccgacgatcaggtgaaatcgattttgcaaaagcctattcagattgagtccgaa
agaaaggcgattgagacatttaaatatgctctggatacgacttcacgggatctggacaat
cttttaaaggaaaatacggagcagcaatacgatcctgagcagcacgaaacggtcattaag
gcaaaagaaacattaactgaaaacctcaatgcattccgtaaagaagaaggcggattagac
cggctactgaaaaaaatggccgaagatctggctaaaaaagcagcattactaactgaaaaa
gcccgtttgcaattacgaaaagaacatctggacgatcttaccaagctgttccgttccagc
ggttttgtggattatgcatccagcatttacctccaaaatctcatccaggccgccaaccat
cgcttccatcaaatgacgcatcagcagctgcatctggaattgggcgaaggcaacagtttt
tgggtccgcgatttgctcaacggcggacatctgcgcttgctgaaaacattatcaggcggc
cagaaatttcaggccgcgctgtcattagcattagcccttgccgatcacattcacgtcagg
aacggttcgaagcataatttcttcttcctggatgaaggctttggctcgttggataaaaat
gcattgcaaactgtttttgaaaccctgaaatcgttgcggaaggagaatcggatagttggc
atcatcagccatgtggaagacctgcaacaggagattcaaacgtatctgagcattcaagag
accgaggaaggaagccggattatgcccagttggaagtga
DBGET
integrated database retrieval system
