Dyadobacter chenhuakuii: NFI80_21545
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Entry
NFI80_21545 CDS
T08460
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dyc
Dyadobacter chenhuakuii
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dyc03032
]
NFI80_21545
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_21545
Enzymes [BR:
dyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NFI80_21545
DNA replication proteins [BR:
dyc03032
]
Prokaryotic type
DNA Topoisomerases
NFI80_21545
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NFI80_21545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
USJ30432
LinkDB
All DBs
Position
complement(5162026..5163126)
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AA seq
366 aa
AA seq
DB search
MSVAVAVGTLTEAPVITAKQIKKLRKDPALTAAAAGLNYIQSGNAPGFLRKGKSPRFYYV
DKNGNRAKDKEQIKRIKSLVLPPAWREVWISEDPEAHLQATGIDEAGRKQYRYHPHWNLI
RNQTKYYRLLTFSEALPLLREQVEHDLRKHNFDLNKSIALVIKLMDKTCMRVGNQRYKLK
HGSSGITTLDARCATVKGSTIRFMFTGKKGVKQDITLRDTQLARLVKQYKEMPGKRLFQY
TQENGGRCSLNAGQVNDYIRKYTGSNFSAKDFRTWMGTVTAFEYLSHQEKSETQRQLTRT
LNTCLDVVAAHLGNTRTVCKKYYVHPAVFRAYENGKIQRFLNKQVEEMKLFTPSEQHVKS
LLAHQV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagccgtagcagttgggacgttgacggaagctcccgtcatcactgcaaaacaa
attaaaaaattaagaaaagatcctgcccttacagccgctgcggcagggttaaattatatt
cagtctggcaatgcgcccggttttctgcgaaaagggaaatccccgcgtttttattatgta
gataaaaacggtaacagggcaaaggacaaagaacagatcaaaaggatcaaatcgctggtg
ttgccaccggcatggcgggaagtgtggatcagtgaagacccggaagcgcatcttcaggcg
acgggcattgatgaagctggccgcaagcaataccgctatcatccgcattggaacctgatc
cggaatcaaaccaaatactatcgcctgctgacattctcggaagcacttcctttgctcagg
gaacaggtggaacacgatcttcgcaagcataattttgacctgaacaagtccatcgccctg
gtcatcaagcttatggacaaaacctgtatgcgggtgggtaaccagcgttataagttgaag
cacggttcttcgggcatcacaacacttgacgcgcgatgcgcaacggtgaaaggcagcaca
atccggtttatgtttacaggaaaaaaaggcgttaagcaagacattacactgagggacacg
caactggcaagactggtaaaacaatacaaggaaatgcccggaaaacggctctttcaatac
acccaggaaaatggcggtcgctgctcgcttaatgcaggccaggtgaatgactacattcga
aaatacacgggttctaatttctccgcaaaagatttcaggacctggatgggcaccgtcact
gcattcgagtatctgagccatcaggaaaaatccgaaacccagcggcagcttaccaggaca
ttaaacacttgtctggacgtggtggcggcacatttgggaaatacccggacggtatgtaaa
aaatattacgtccatccggcggttttccgggcttatgaaaacggaaaaatccaaaggttc
cttaacaagcaggtggaggaaatgaagctcttcaccccgagtgagcaacacgtaaagtcg
ttgctggcgcatcaggtctaa
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