Dyadobacter chenhuakuii: NFI80_23460
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Entry
NFI80_23460 CDS
T08460
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
dyc
Dyadobacter chenhuakuii
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dyc03036
]
NFI80_23460 (xerD)
Chromosome and associated proteins [BR:
dyc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NFI80_23460 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
USJ30803
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All DBs
Position
complement(5589045..5589941)
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AA seq
298 aa
AA seq
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MWQSYIKHFKNYLRLERSLSGNSVEAYVRDVEKLEEYLELAKIDLPPAKITEEHLADFLK
YLSELGLAAHSQARMLSGIKAFFRYLLLENEITEDPTELLESPRLPRKLPDVLSYEEIET
MLSAIDHSTPEGTRNRAIIEVLYSSGLRVSELTGLQLTHCYFDIGFLRILGKGDKVRLVP
IGKEAIKYTQIYLEHVRNDIAPAKDAEDIVFLNRRGGQLSRVMIFIMIKDIVEKAGIHKN
VSPHTFRHSFATHLIEGGASLRAVQEMLGHESITTTEIYTHLDRDYLRQVITEFHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaagctacatcaaacattttaaaaattatcttcggctggaacgctccctatcg
ggcaattcagtggaggcttatgtgcgagatgttgagaaactggaagaatatcttgaattg
gcaaaaatcgatttgccccctgcgaagattacggaggaacatttagcggattttctgaaa
tatctgtccgagctcggcctggcggcacattctcaggcgaggatgctttcgggcattaaa
gcttttttcagatatcttttgctggaaaatgagattaccgaggacccgaccgaactgctg
gaatcccctcgcctgccgcgcaagttgccggatgtgctttcctatgaagaaattgaaaca
atgctctccgccatcgatcattccacgccggaaggaacgcgaaatcgggcgatcattgaa
gtgctgtacagttcgggcttgcgagtttcagaattgactggcttgcaactgacccattgt
tatttcgacattggctttctgcggattttaggaaaaggcgataaggtaagactggtcccg
attggcaaagaagccattaaatacacccagatttacctcgaacacgtccgtaatgacatt
gcaccggccaaggatgcagaggacattgttttcctgaacagaagaggcggtcagctttct
cgtgtgatgatttttataatgatcaaggacattgtggaaaaggcaggaatccacaaaaat
gtgagcccgcacacattccggcattcatttgcgacacatttgatcgaaggtggcgcgagc
ttgcgcgcagtgcaggaaatgcttgggcatgagtcgattacgaccacggaaatctatacg
cacctggatcgcgattatctccggcaggttattacggaatttcacccgcggggttga
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