Dyadobacter chenhuakuii: NFI80_23705
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Entry
NFI80_23705 CDS
T08460
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc02020
Two-component system
dyc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFI80_23705 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NFI80_23705 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dyc03021
]
NFI80_23705 (rpoN)
Transcription machinery [BR:
dyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFI80_23705 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Ada3
DUF4661
Motif
Other DBs
NCBI-ProteinID:
USJ30851
UniProt:
A0A9X1U2P8
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All DBs
Position
5642389..5643831
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AA seq
480 aa
AA seq
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MQRQTQTQRQTLKYSPLQIQMLNLLHLTTMELEQRIKEELEENPILEEGKDDNASEDTVD
DFQDPADTGTGDDNTMQDYYDWDEFRDDDVPDYKTYANNQSPDNELYTRPMVETISFRDD
LKQQVHFLRLDERQQLIADFILDSLDEDGFLRRESDVIADDISFANSMFIDTEEVNWMLK
IIQQLDPAGIAASDLRECLLIQLGRIENQDDTWKWACKIVTDAFDELGSRNYDKIMRITG
LDEESLKKAIALITTLNPKPASGLRNDSIVNESIKPDFMLRYTEDGDIEVQLTWGNSPAL
RLNKLFTQMAEQKNDKATNQFLKNKMNSAKWFIDAIKQRENTMLSTLRAIVKLQYDYFQT
GDIKKLRPMILKDVAEIISMDISTVSRVTTNKYVQTPFGIVLLKDLFTEGVTNEDGTEVS
NREIQEAIREIVGAEDKRHPYNDQQITDMLSEKGYSVARRTVAKYREQLNIPTARLRVTI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacaaacgcagacgcaaagacagaccctgaaatattctccgttgcaaattcag
atgctgaatttactgcatttgacaacaatggagcttgaacaaagaattaaagaggagctt
gaagaaaatcctattttagaggagggtaaggacgataatgcttcggaagatactgttgac
gactttcaagatcctgccgacaccggaaccggtgatgataataccatgcaggattattac
gactgggatgagttcagggacgatgatgttccggattataagacttatgccaacaaccag
tcgcctgataatgagctttacacacgtcctatggtggaaacaatttccttccgggacgac
cttaaacagcaagtacatttcctgaggctggacgagcgccagcagctgattgcggatttt
attctggattccctggatgaagatggtttcctgagacgtgaaagcgatgtaattgccgat
gatatttcctttgccaacagcatgtttattgacaccgaagaggtcaattggatgcttaaa
atcattcagcagcttgatcccgcaggaatcgcggcgagcgatcttcgggaatgtctgctg
attcagcttggccgcatcgaaaaccaggacgacacctggaagtgggcctgcaaaattgtt
acagatgcgtttgatgagctgggttcaagaaattatgacaagatcatgcgcattaccggc
ctcgacgaggaatcgttgaagaaggccatcgcactgatcaccacattgaatccaaaacca
gcatccggcctccgcaatgattccatcgtgaatgaaagcattaagccggattttatgctt
cggtatacggaggacggtgatatagaagtgcagcttacatggggtaacagcccggctttg
cggttgaacaaattgtttacccaaatggccgaacaaaagaacgataaggcaacgaaccag
ttcctgaaaaataagatgaattcggcgaaatggttcattgatgcgatcaagcagcgtgaa
aacacaatgctgagcacattaagggccatcgttaagttgcaatacgactatttccaaacg
ggcgacatcaagaagttacgccccatgatcctgaaagacgttgccgagatcatcagtatg
gatatttcgacagtatcgagggtaacgacgaataaatacgttcagacacctttcgggatc
gtactgctcaaagaccttttcacagaaggcgttaccaatgaggacggcacagaggtttcc
aaccgtgaaattcaggaggcgatccgggagatcgtaggagcagaagacaaaagacatcca
tacaacgaccagcaaattacagacatgctttctgaaaaaggctattctgtggctagaagg
accgttgcgaaataccgggaacaattaaatatcccgactgcaagattaagagtaaccatt
taa
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