KEGG   Dyadobacter chenhuakuii: NFI80_23705
Entry
NFI80_23705       CDS       T08460                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
dyc  Dyadobacter chenhuakuii
Pathway
dyc02020  Two-component system
dyc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dyc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NFI80_23705 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NFI80_23705 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dyc03021]
    NFI80_23705 (rpoN)
Transcription machinery [BR:dyc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NFI80_23705 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Ada3 DUF4661
Other DBs
NCBI-ProteinID: USJ30851
UniProt: A0A9X1U2P8
LinkDB
Position
5642389..5643831
AA seq 480 aa
MQRQTQTQRQTLKYSPLQIQMLNLLHLTTMELEQRIKEELEENPILEEGKDDNASEDTVD
DFQDPADTGTGDDNTMQDYYDWDEFRDDDVPDYKTYANNQSPDNELYTRPMVETISFRDD
LKQQVHFLRLDERQQLIADFILDSLDEDGFLRRESDVIADDISFANSMFIDTEEVNWMLK
IIQQLDPAGIAASDLRECLLIQLGRIENQDDTWKWACKIVTDAFDELGSRNYDKIMRITG
LDEESLKKAIALITTLNPKPASGLRNDSIVNESIKPDFMLRYTEDGDIEVQLTWGNSPAL
RLNKLFTQMAEQKNDKATNQFLKNKMNSAKWFIDAIKQRENTMLSTLRAIVKLQYDYFQT
GDIKKLRPMILKDVAEIISMDISTVSRVTTNKYVQTPFGIVLLKDLFTEGVTNEDGTEVS
NREIQEAIREIVGAEDKRHPYNDQQITDMLSEKGYSVARRTVAKYREQLNIPTARLRVTI
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgcaaagacaaacgcagacgcaaagacagaccctgaaatattctccgttgcaaattcag
atgctgaatttactgcatttgacaacaatggagcttgaacaaagaattaaagaggagctt
gaagaaaatcctattttagaggagggtaaggacgataatgcttcggaagatactgttgac
gactttcaagatcctgccgacaccggaaccggtgatgataataccatgcaggattattac
gactgggatgagttcagggacgatgatgttccggattataagacttatgccaacaaccag
tcgcctgataatgagctttacacacgtcctatggtggaaacaatttccttccgggacgac
cttaaacagcaagtacatttcctgaggctggacgagcgccagcagctgattgcggatttt
attctggattccctggatgaagatggtttcctgagacgtgaaagcgatgtaattgccgat
gatatttcctttgccaacagcatgtttattgacaccgaagaggtcaattggatgcttaaa
atcattcagcagcttgatcccgcaggaatcgcggcgagcgatcttcgggaatgtctgctg
attcagcttggccgcatcgaaaaccaggacgacacctggaagtgggcctgcaaaattgtt
acagatgcgtttgatgagctgggttcaagaaattatgacaagatcatgcgcattaccggc
ctcgacgaggaatcgttgaagaaggccatcgcactgatcaccacattgaatccaaaacca
gcatccggcctccgcaatgattccatcgtgaatgaaagcattaagccggattttatgctt
cggtatacggaggacggtgatatagaagtgcagcttacatggggtaacagcccggctttg
cggttgaacaaattgtttacccaaatggccgaacaaaagaacgataaggcaacgaaccag
ttcctgaaaaataagatgaattcggcgaaatggttcattgatgcgatcaagcagcgtgaa
aacacaatgctgagcacattaagggccatcgttaagttgcaatacgactatttccaaacg
ggcgacatcaagaagttacgccccatgatcctgaaagacgttgccgagatcatcagtatg
gatatttcgacagtatcgagggtaacgacgaataaatacgttcagacacctttcgggatc
gtactgctcaaagaccttttcacagaaggcgttaccaatgaggacggcacagaggtttcc
aaccgtgaaattcaggaggcgatccgggagatcgtaggagcagaagacaaaagacatcca
tacaacgaccagcaaattacagacatgctttctgaaaaaggctattctgtggctagaagg
accgttgcgaaataccgggaacaattaaatatcccgactgcaagattaagagtaaccatt
taa

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