Dyadobacter chenhuakuii: NFI80_25245
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Entry
NFI80_25245 CDS
T08460
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFI80_25245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyc03400
]
NFI80_25245
Enzymes [BR:
dyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NFI80_25245
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NFI80_25245
DNA repair and recombination proteins [BR:
dyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFI80_25245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
DUF1374
Ribosomal_S13
DUF1667
Motif
Other DBs
NCBI-ProteinID:
UTM21783
LinkDB
All DBs
Position
unnamed:17847..18698
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AA seq
283 aa
AA seq
DB search
MFCSKLIKSCIILLLSEFENQLAMPEVPELNLVGLTLQKHFKGQKFKRIEVLWKKRVKAS
EEEFNETLKGATLKSVTRNGKELHLKFDNDAILGIHMMLTGKMILMPTDQDLRNPIFELT
FENGAGIVVLDGLGQAKPILNPEVPAVPDIMGDDFTGEYLAKVLAKAGGKIKEVIQNQKW
IRGIGSAYADEILWAAKISPFSVAKNIPADKVEDLYKAIRDVTVEATAQLEQLKTSDDVF
EMENKDHRFVHNPKKTHSPEGEEIIVGKIGSGRTYYTKSQTLY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgttttgctccaaactaataaaaagttgcatcatcttattactttcagaattcgaaaat
caactagccatgccagaagtacccgaacttaatcttgtgggcctgaccctgcagaaacat
tttaaaggccaaaaatttaaaagaattgaagtgctttggaaaaagcgcgtcaaggccagt
gaagaagaatttaacgagacattgaaaggggcaaccctgaaatctgttacccgaaatgga
aaggagcttcacttaaaatttgataatgatgctattttgggcatccatatgatgttaacg
ggcaaaatgattttgatgccaaccgaccaagatttaagaaatccgatcttcgaattaacc
tttgagaacggtgcgggcatcgttgtgttggatgggctcggccaggcaaagcctattttg
aaccctgaggtacccgccgtgcccgacattatgggagacgatttcacgggcgagtatttg
gcaaaggtccttgcaaaggcgggcggcaaaataaaggaggtgattcaaaaccaaaaatgg
atccgcggaattggcagtgcttacgccgacgaaatcttgtgggctgccaagatatctcct
ttttccgttgccaagaacatccctgctgacaaagtagaagacctttacaaggcaatccgg
gacgtcacggttgaagccacagcacagttagagcaacttaaaacatccgatgatgttttc
gagatggaaaacaaagatcaccgctttgtccataatcctaaaaaaacacattctcctgaa
ggagaggagatcattgttggtaaaataggaagtggaaggacttattatactaaaagtcag
accttatattaa
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