Dyella sp. M7H15-1: EO087_00795
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Entry
EO087_00795 CDS
T05846
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dye
Dyella sp. M7H15-1
Pathway
dye03410
Base excision repair
dye03430
Mismatch repair
dye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EO087_00795 (recJ)
03430 Mismatch repair
EO087_00795 (recJ)
03440 Homologous recombination
EO087_00795 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dye03400
]
EO087_00795 (recJ)
DNA repair and recombination proteins [BR:
dye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EO087_00795 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EO087_00795 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EO087_00795 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QAU22698
UniProt:
A0A410UEM0
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All DBs
Position
132853..134574
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AA seq
573 aa
AA seq
DB search
MSKLQLRQRLLLSEPAGWGDSLHPLLQRIYAARGVFSPDQAEHRLNRMLPPRQLGGMQPA
VALLAQAIRDDASIMITGDYDCDGATGTAVAVRGLRLLGARKVDYAVPNRFVHGYGLTPE
LVASLPDHVQLVVTVDNGVASVAGVAAARARGMRVIVTDHHLPGELLPAADAIVNPNLHG
DDFPSKALAGVGVMFYVLLALRAHLREQGHFSVGAEPDLSVLLDLVALGTVADLVPLDFN
NRVLVEAGMKRLRSRRGCAGITALIEASQRSVFTLCTSDLGYAVGPRLNAAGRLEDMRLG
VECLLTDDARQARYYAEMLSSINQERRDLQATMVAEAELMVAQTTGVDENKVGVSLFEPS
WHAGVVGLVAAKLKERLHRPVIAFAPAGEDDPDHLRGSARSISGFHIRDALAAIDARHPG
LIERFGGHAMAAGLSLRTQDYLRFAAAFDAVAREWLSEEQLQAVLYTDGEMPAGMFTLEM
ARLLRFAGPWGQAFPEPVFENCFECFRWRQMGEKHLRMSLRDPRDDALYDAVMFNAYDGH
PPPTMLRAAYELTINDWQGRASPRLLLRHIEAT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactgcaattacgccagcgccttttgctgagtgaaccggcaggatggggtgat
agcttgcacccgttgctgcagcgtatctatgccgcgcgtggcgtcttcagccccgatcag
gcggaacaccgtttgaatcgtatgttgccgccgcggcagttgggcggcatgcagcctgcg
gtcgcattgctggcgcaagccattcgcgacgatgcctcgatcatgatcaccggcgattac
gattgcgacggtgccactggcacggcggtggctgtgcgcgggctacgcctgctcggcgcg
cgcaaggtggattacgcggtgccgaaccgctttgtccacggctacggcctgacgccggaa
ttggtggcttcgctgcccgatcacgtacagcttgtggtaaccgttgataacggtgtcgcc
agcgtagctggcgtcgccgctgcgcgggcgcgtggcatgcgcgtcatcgttacggatcat
cacttgcccggcgagctcctcccggctgcggatgccatcgtcaatcccaacctgcatggc
gatgatttccctagcaaggcattggctggtgtaggtgtcatgttttacgtactgctcgca
ctgcgagcgcatttgcgcgaacaggggcatttcagcgtcggcgccgagcccgatctctca
gtgctgctcgatctggttgcgctgggtacggtggccgatctggtgccgctggatttcaac
aatcgcgtgttagtggaagccggcatgaaacgcttgcgcagccgccgtggctgcgccggt
atcacggcgctgatcgaagccagccaacgcagcgtgttcacgctgtgcactagcgatctt
ggttatgccgtcgggccacgcctgaacgcagcgggccgactggaagatatgcggctgggc
gtggagtgcctgcttactgatgatgcccgccaggcgcgttattacgccgagatgctcagc
tcgatcaaccaggaacgccgcgacctgcaagcgacgatggtggccgaggccgagctgatg
gtggcgcagaccaccggcgtggatgaaaacaaggttggcgtgagcttgttcgagccgagc
tggcatgcaggcgtggtgggtttggtggctgccaagctgaaggagcgactgcatcgtccg
gtcattgcgtttgcgccggcaggtgaagacgatccggatcacctacgtggttcggcgcgc
tcgatttccggtttccacattcgtgatgcactggcggccatcgatgcgcgccatccggga
ttgatcgaacgcttcggcgggcacgccatggcggctggcctgagtttgcgcacgcaggac
tacctgcgtttcgctgccgctttcgatgctgtggcccgcgagtggttgagcgaagagcaa
ctgcaagcggtgctttacaccgatggcgaaatgccggccggcatgttcacgttggagatg
gcccgcctgctgcgttttgcggggccatggggccaggcatttcccgagccggtgttcgag
aattgcttcgagtgtttccgttggcgccagatgggcgaaaaacatctgcgcatgagctta
cgcgatccgcgtgacgatgcgctctatgatgccgtgatgttcaacgcctacgatgggcat
cctccgcctaccatgttgcgcgcggcctatgagctgactattaacgattggcaggggcgc
gcatcgccgcgcctgctattgcggcacatcgaggccacctga
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