Dyella sp. M7H15-1: EO087_05305
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Entry
EO087_05305 CDS
T05846
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dye
Dyella sp. M7H15-1
Brite
KEGG Orthology (KO) [BR:
dye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dye03009
]
EO087_05305 (rimO)
Enzymes [BR:
dye01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EO087_05305 (rimO)
Ribosome biogenesis [BR:
dye03009
]
Prokaryotic type
ribosomal protein modification factors
EO087_05305 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QAU23472
UniProt:
A0A410UH30
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Position
complement(1101567..1102883)
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AA seq
438 aa
AA seq
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MSSSYRIGMVSLGCPKALVDSERILTQLKVEGYEIVTTYDAADAVVVNTCGFIDAAVQES
LDAIGEALHENGKVIVTGCLGKRSELIREAYPDVLAITGPQDYSSVMSAVHVALPPKRNP
LLDIIPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLVEAEKLVKG
GVKELLVISQDTSAYGVDIKYAERTWREKRYRTRMTELCEGLAELGVWTRLHYVYPYPHV
DEIMPLMAEGKSLPYLDIPFQHASPRILKLMKRPGNIDKTLERIQNWRKQVPELTLRSTF
IVGFPGETDAEFEELLDFLREAELDRVGAFTYSPVDGAKANELPDPVSEELKEDRLEQFM
AVQAEISAAKLQRKIGRTIKVLVDEAHAEGAVARSAADAPEIDGVVRIANGQSLKPGQFV
DVVVEAADEHDLHASLVN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcttatcgtataggtatggtatccctcggttgccccaaggcgctggtcgat
tccgagcgcatccttacccagctcaaggtcgaggggtatgagatcgtgaccacctatgac
gcggctgacgcggtggtggtgaatacttgcggctttatcgatgctgccgtgcaggagtcg
ctggatgcgatcggcgaggccttgcacgagaacggcaaagtgattgtgaccgggtgtttg
ggcaagcgctcggagctgattcgcgaggcgtatccagacgtgctcgccattaccgggccg
caggattactccagcgtaatgagcgcggtgcatgtcgcgttgccgccgaagcgcaatccg
ctgctggatatcattccggatacgggtatcaagctcacgccgaaacactatgcgtatctg
aagatatccgaaggctgcaatcatcgttgcagcttctgcatcatcccgtcgatgcgcggg
gatctggtatcgcgtccagtggacgaggtgctggtcgaagcggaaaaactggtgaagggc
ggtgtgaaggagctgctggtgatctcgcaggacaccagtgcctatggcgtcgatatcaag
tacgccgagcgcacgtggcgcgagaagcgttatcgcacgcgcatgaccgaactgtgcgaa
ggtcttgcggaacttggcgtctggacacgtctgcattacgtctacccgtatccgcacgtt
gacgaaatcatgccgttgatggcggaaggcaagagcctcccgtatctggacattccattc
cagcacgccagcccgcgtatcctcaaattgatgaaacgtccgggcaatatcgacaagacg
ctggagcgcatccaaaactggcgaaaacaggtgcctgaactcactttgcgcagcaccttt
atcgttggtttccccggcgaaacggatgcggagttcgaggagctgctcgacttcctgcgc
gaagccgagctggatcgcgtcggtgcgtttacttactcgccagtagatggcgccaaggcc
aacgaattgccggacccggtgtccgaggagttgaaggaagatcgccttgagcagttcatg
gcggtgcaggcggaaatttctgccgccaaactgcagcgcaaaatcggtcgcacgataaag
gtgctagtggatgaagcccatgcggagggtgcagtggcgcgttcggctgcggatgcgccg
gagattgacggcgtggtgcgcattgccaacggccagtcgctgaagccgggtcagtttgtc
gacgtcgtggtcgaggcggcggacgaacacgacttgcacgccagcctggtcaactga
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