Dyella sp. M7H15-1: EO087_07545
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Entry
EO087_07545 CDS
T05846
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dye
Dyella sp. M7H15-1
Pathway
dye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EO087_07545 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dye03019
]
EO087_07545 (pnp)
03016 Transfer RNA biogenesis [BR:
dye03016
]
EO087_07545 (pnp)
Enzymes [BR:
dye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EO087_07545 (pnp)
Messenger RNA biogenesis [BR:
dye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EO087_07545 (pnp)
Transfer RNA biogenesis [BR:
dye03016
]
Prokaryotic type
tRNA degradation factors
EO087_07545 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QAU23860
LinkDB
All DBs
Position
complement(1605621..1607726)
Genome browser
AA seq
701 aa
AA seq
DB search
MAKVTKSFQYGNHEVTLETGEIARQASGAVMVSMGGTVVLVTVVAASKAKEGQDFFPLTV
DYVEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPVRPLFPEEFKNEVQIIAQVVSLN
PEIDGDIPAMLGASAALTLAGIPFKGPIGAARVGYANGKYLLNPTVAELKTSDLDLVVAG
TANAVLMVESEAKLLSEEVMLGAVIYGHQQMQTAVQAISDFVAHAGRKAFAWTAPVRNDA
LFSDINSILGDRLEKAFAIRDKLERRDAISALKADIKAGIAETAVTRGWSDLDISNAFAD
IEYRTMRDGVLKTKVRIDGRKLDDIRPISVRVGVLPRTHGSALFTRGETQALVVATLGTA
RDAQIIDAPEGESKDPFLFHYNFPPFSVGEAGRFGAPKRREIGHGRLAKRGVQAVKPSME
EFPYVLRVVSEITESNGSSSMASVCGSSLAMMDAGVPLKAPVAGIAMGLVKEDNDFVVLS
DILGDEDHLGDMDFKVAGSAEGVSALQMDIKIEGITEEIMKLALEQAKRGRLHILGEMAK
VISTPRSEMSEYAPRLLTIKIHPDKIREVIGKGGATIRSITEETGTTIDISDDGTVVIAS
VNRLAAEEAKKRIDQIVSDVEPGRIYEGKVAKLMDFGAFVTILPGKDGLVHVSQISNERV
EKVSDKLKEGDIVKVKVLEVDKQGRIRLSMKAVTEDEGASA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagtaaccaagtcattccagtacggtaatcacgaagtcacactggagacgggc
gaaatcgcccgccaggcttcaggcgccgtcatggtcagcatgggcggcaccgtggtgctc
gttaccgtggtggctgcgtccaaggcgaaagaagggcaggatttcttcccgctcaccgtc
gactacgtcgagaagttctactccgccggtcgtatcccgggcggtttcttcaagcgtgaa
ggccgcccgaccgagaaggagacgctcacctcgcgtctgatcgatcgtccggtgcgtccg
ctgttcccggaagagttcaagaacgaagtgcagatcatcgctcaggtggtctcgctgaat
ccggaaatcgacggtgacatccccgccatgctcggcgcctccgctgcgctgaccctggcc
ggcattccgttcaagggcccgatcggcgcggcgcgcgtgggttatgcgaacggcaagtac
ctgctgaacccgaccgttgccgagctgaagacctccgacctggatctggtcgtcgccggt
acggccaacgcggtgctgatggtggagtccgaagccaagctgctcagcgaagaagtcatg
ctgggcgcggtgatatacggtcaccaacagatgcagacggcggtccaggccatcagcgac
tttgtcgcccacgccggccgcaaggctttcgcatggaccgctccggtgcgcaacgacgcg
ctgttcagcgacatcaacagcatcctcggcgaccgcctggaaaaggctttcgcgatccgc
gacaagctggaacgccgcgatgcgatctccgcactcaaggccgacatcaaggccggcatc
gccgaaaccgccgtaacgcgcggctggtccgacctcgatatcagcaacgcgtttgccgac
atcgaataccgcaccatgcgcgacggcgtgttgaagaccaaggtgcgtatcgacggccgc
aagctggacgacatccgtccgatcagcgtgcgcgtgggcgtgctgccgcgtacgcatggt
tcggcgctgttcactcgcggcgaaacccaggcactggtcgtggccacgctcggtacggcg
cgcgatgcgcagatcatcgatgcgccggaaggcgagtcgaaggatcctttcctgttccac
tacaacttcccgccgttctcggtcggtgaagccggtcgcttcggcgcgcccaagcgtcgc
gaaatcggccacggccgtctcgccaagcgcggcgtgcaggccgtgaagcccagcatggaa
gaatttccgtacgtgctgcgcgtggtgtctgaaatcaccgagtcgaacggctcttcctcg
atggcttcggtgtgcggttcctcgctagccatgatggacgctggcgtgccgctcaaggcg
ccggtggcaggtatcgccatgggtctggtgaaggaagacaacgacttcgtcgtgctgtcc
gacatcctgggtgacgaagaccacctcggcgatatggatttcaaggtggctggtagcgct
gaaggcgtgtccgcgctgcagatggacatcaagatcgagggcatcaccgaagaaatcatg
aagctggcgctggagcaggccaagcgtggtcgtctgcacatcctgggcgagatggccaag
gtgatcagcacgccgcgttcggaaatgagcgaatacgcgccgcgtctgctcaccatcaag
atccatccggacaagattcgcgaagtgatcggcaagggtggtgccaccatccgctccatc
accgaggaaaccggcaccaccatcgacattagcgacgacggcaccgtggtcatcgcctcg
gtcaaccgtttggccgccgaagaggcgaaaaagcgcatcgaccagatcgtttccgacgtc
gagccgggccgtatctacgaaggcaaggttgccaagctgatggatttcggcgcgttcgtg
accattctgccgggcaaggacggcctggtgcacgtgtcgcagatttccaacgagcgcgtc
gagaaggtttccgacaagctcaaggaaggcgacattgtcaaggtcaaggtgctggaagta
gacaagcagggccgtatccgcctgtcgatgaaggcggtcaccgaggacgaaggcgccagc
gcctga
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