Dyella sp. M7H15-1: EO087_08465
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Entry
EO087_08465 CDS
T05846
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dye
Dyella sp. M7H15-1
Pathway
dye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EO087_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dye03019
]
EO087_08465
Enzymes [BR:
dye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EO087_08465
Messenger RNA biogenesis [BR:
dye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EO087_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QAU24021
UniProt:
A0A410UII4
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All DBs
Position
1799853..1801172
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AA seq
439 aa
AA seq
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MSFESLGLAPALLRALAEQGYAEPTPIQAGAIPVVLEGHDLLAAAQTGTGKTAAFSLPLL
QRMSNSAPAGTRRPRALILTPTRELAAQIHGNLRDYGKHLRTSSAVIFGGVSMGPQVQAL
RRGVDIVIATPGRLVDHMQQRTLDLSGIEVLVLDEADRMLDMGFLPSLKRIVGALPKQRQ
TLLFSATFAPEIKSLAMQFMQSPREVSVTPANSVATTVSHQVYPVDGPRKRDLLLHVLSE
DSRRQTLIFSRTKHGADKLVRYLEQSGLHAAAIHGNKSQNARTRALADFKSGRVTVLVAT
DIAARGIDIDQLPIVINYDLPMVAEDYVHRIGRTGRAGAEGVALSLVSHEESGLLRDIRK
LLNQDIAIVEMPGFELSAPLRLDAHAPRPKQGQRQPRPQRQGGSSHRPHGHAQQNNGGGE
HAMGNRKRRSRGRRPAAKA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgagtcgctgggcctggcccctgcgttgctgcgtgcgcttgccgaacaaggc
tacgccgaacccacccccatccaggccggagccattccggtggtactggaaggccacgat
ctgctggccgccgcacagaccggcaccggcaagaccgctgccttttcgttgcccctgctg
cagcgcatgtcgaatagcgcgcccgccggcacgcgccgtccgcgcgcgttgatcctcacc
cccacacgcgaactcgccgcgcagattcatgggaacctgcgcgactacggcaagcatctg
cgtaccagcagcgcggtgatcttcggcggcgtgagcatgggaccgcaggtgcaggcactg
cgccgcggtgtggatatcgtcatcgccacgccaggtcgtctggtcgatcacatgcagcag
cgcacgctcgacctgagcggtatcgaggtgctggtgctggatgaggcggatcgcatgctc
gatatgggctttctgccctcgctgaagcgcatcgtcggcgcattgcccaagcagcgccag
acgctgctgttctccgccaccttcgcaccggaaatcaaatcgctggcgatgcagttcatg
caatccccacgtgaagtatcggtaacaccggccaacagcgtggccacgacggtcagccat
caggtgtatccggtggatggtccacgcaagcgcgacctgctgttgcacgtgctcagcgag
gacagccgccggcaaacgctgatattcagccgcaccaagcatggtgccgacaagctggtg
cgctacttggagcagtccggcctgcacgctgccgccattcacggcaacaagagccaaaac
gcgcgcacccgcgcgctcgccgatttcaagagcggccgcgttaccgtgctggtcgcaacg
gatatcgccgcgcgtggtatcgatatcgatcagttgcccatcgtgatcaactacgacctg
ccaatggtggcggaggattatgtgcatcgcatcggccgtacgggtcgcgcgggtgccgag
ggcgtcgcgctgtcgttggtgagccacgaggaatctggcctgctgcgcgatatccgcaag
ctgctcaaccaggacatcgccattgtcgaaatgcctggtttcgaactttccgcgccgctg
cgcctggatgcgcatgcaccacgccccaagcagggacagcgccagccgcgtccgcaacgc
cagggtggttcgtcgcatcgtccgcacgggcatgctcagcagaacaatggtggtggcgag
catgcgatgggaaatcgcaagcggcgctcgcgtggtcgcaggcctgcggcgaaggcttaa
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