Dyella sp. GSA-30: DYGSA30_02420
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Entry
DYGSA30_02420 CDS
T10269
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dyg Dyella sp. GSA-30
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dyg03021
]
DYGSA30_02420 (rpoH)
Transcription machinery [BR:
dyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DYGSA30_02420 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
KORA
Thioredox_PDIA6_C
Hema_esterase
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
BDU18785
LinkDB
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Position
complement(269787..270644)
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AA seq
285 aa
AA seq
DB search
MSQALATASLPVPSVVGSLDAYISAVHRIPVLSQDEEQALSRRFNDDNDLDSAKKLVMSH
LRFVVHVARGYNGYGLQLSDLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHWIRAEMHEFI
LRNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNAEEVRVVAKDLGVPEATVREMESRLSG
RDIGFEAPADADDDAKPAPEAFLIDDGADPYDNVSDADHADNQLETLSEALQKLDQRSRD
IIQRRWLNDDKATLQDLADEYGVSAERIRQVEANAMKKMRGLFAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagctttggcgaccgcctctctgccggtacccagtgtagtcggcagcttggat
gcgtatatctcggcggtccaccgtatcccggtgctcagccaggacgaggagcaggcgttg
tcgcgtcgattcaacgatgacaacgacctcgactccgccaagaagctggtgatgtcgcac
ctgcgtttcgtggtgcacgtcgcccgcggttacaacggttatggtttgcagctgtccgac
ctgatccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttcgacccggaccag
ggcgtgcgtctggtcagctttgccgtgcactggattcgcgccgaaatgcacgagttcatc
ttgcgcaactggcgcatcgtcaaggtcgctacgaccaaggcgcagcgcaagctgttcttc
aacctgcgcaagagcaagaagcgcctgggttggatgaatgctgaggaagtgcgcgtggtc
gccaaggatcttggcgtgcccgaggcgactgtccgcgagatggaatcgcgtctgtccggc
cgtgatatcggtttcgaagcgccggccgatgcggacgacgatgccaagccggcaccggaa
gcattcctgatcgacgatggcgccgacccgtacgacaacgtctccgacgccgaccacgct
gacaatcagctggaaacgctgtccgaggcgctgcaaaagctcgatcagcgttcgcgcgac
atcatccagcgtcgttggttgaacgacgataaggcgacgttgcaggatctggccgacgag
tacggtgtttctgccgagcgtatccgtcaggtcgaggcgaacgcgatgaagaaaatgcgc
gggttgtttgctgcgtaa
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