Dyella sp. GSA-30: DYGSA30_02790
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Entry
DYGSA30_02790 CDS
T10269
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DYGSA30_02790 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyg03400
]
DYGSA30_02790 (mutM)
Enzymes [BR:
dyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DYGSA30_02790 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DYGSA30_02790 (mutM)
DNA repair and recombination proteins [BR:
dyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DYGSA30_02790 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BDU18822
LinkDB
All DBs
Position
308417..309244
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIAPHLIGRRITAVTLRRTDLRWPIPKEITELLPGQRIDAVERRAKYL
LLHTQAGSALLHLGMSGMLRVLPPDAPLGKHDHVDIVVEAKATQGERVLRFTDPRRFGCL
LWQPPESTHELLADLGPEPLTDDFDGDLLWRMSRGRKAAVKLFLMDNAIVVGVGNIYASE
ALFAAGIDPRRAAGSVSRERYARLAAEVKRILAWAIERGGTTLRDFLNPDGAPGYFFREL
NVYGREGEPCRTCSTPIRQTVLGQRSTFWCPRCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactccccgaagtcgaaaccacgcgccgcggcatcgccccgcacttgatcggc
cgacgcatcacggcggtgacgttgcgccgtaccgatctgcgctggccgattccaaaggaa
atcaccgagcttttgccaggccaacgcatcgacgcggtcgaacgtcgcgcgaaatacctg
ctactacatacgcaggccggcagcgcgctgttgcacctgggcatgtccggcatgctgcgc
gtgctgccgcccgatgcaccgttgggcaagcacgaccacgtcgacatcgtcgtcgaggcc
aaggcaactcaaggcgagcgcgtcctgcgcttcaccgatccgcgccgcttcggctgcctg
ttatggcagccgccggaaagcacgcatgagctattggccgacctcggccctgaaccgtta
accgacgattttgacggcgatctgctgtggcgcatgtcacgcggccgcaaagcggcggtg
aagttgttcctgatggataacgccatcgtggttggcgtcggaaacatctatgccagcgaa
gccttgttcgcggcaggcatcgacccccgccgcgccgccggctcggtatcgcgcgaacgc
tacgcgcgcttggcggctgaggtgaaacgcatcctcgcgtgggccattgaacgtggcggc
accacgcttcgcgattttctcaatcctgacggcgcacccggctatttctttcgcgagttg
aacgtctatggccgcgaaggcgagccgtgccgcacgtgcagtacgccgattcgccagacc
gtgcttggacaacgctccactttctggtgtccacgctgccagcgttga
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