Dyella sp. GSA-30: DYGSA30_07840
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Entry
DYGSA30_07840 CDS
T10269
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
dyg Dyella sp. GSA-30
Pathway
dyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DYGSA30_07840 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyg03400
]
DYGSA30_07840 (recF)
DNA repair and recombination proteins [BR:
dyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DYGSA30_07840 (recF)
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Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
ABC_tran
AAA_27
DUF2813
AAA_29
DUF6918
Motif
Other DBs
NCBI-ProteinID:
BDU19327
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Position
881496..882575
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AA seq
359 aa
AA seq
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MRLEQLRVRGLRCLSDADLALGAGINVFIGDNGAGKTSVLEAAFLLSHARSFRSGAKEAL
LQRGAAGLSIFAELRHDDERRVRLGLGRNGSRWEARVDGESVAIGQLVRDCAVVCFEPGS
HALIAGAAEERRRYLDWGVFHVEQLFLPAWRRYQRALKQRNSLLRSGDFITDALLEPWEA
ELTQAGSLIDAQRQAYLELLRPRLAAEVAELLPELGDIELRYKRGWGEGRELAEELRSQR
GRDIARGHTTLGVHRADWSLAFERAPLREHLSRGQEKLTALACVLAQATLFAERRGEWPI
VALDDLASELDATHQASVVRRLTAAGAQVLLTGTELPSALQSVPAQVFHVEQGTIAPLL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgaacaattgcgtgttcgcggcttgcgttgcctttctgatgcggatcttgcg
ttaggagccggaatcaacgtttttatcggtgataacggggccggcaagaccagcgtcctg
gaggcggctttcttgttgtctcacgcgcgatcgtttcgtagcggggcgaaagaggcgttg
ttgcaacgtggcgcagccgggctttcaatattcgcggaactgcgtcatgacgacgagcga
cgggttaggttgggcttagggcgcaatggttctcgatgggaagcgcgggtcgacggcgag
agcgtggctattgggcaactcgttcgtgattgcgcagtggtgtgcttcgagcccggctct
catgcgctgattgcgggggcggccgaagagcggcgccgttatctcgattggggcgtgttc
cacgtggaacagctttttctccccgcgtggcgtcgctatcagcgggcactcaaacagcga
aacagcttgttacgctctggggatttcatcaccgacgccttgctcgaaccctgggaagcc
gagctcacacaagcaggttcactcatcgatgctcaacgacaggcgtacctggaacttttg
cggcccagactggccgcggaagtcgccgagttgctgcctgagctgggcgatatcgaactt
cgctacaagcgtggctggggggagggacgtgagctcgcggaagaactgcgctcgcagcgt
ggcagagatatcgcccgtggtcacacgacgcttggtgtccatcgcgccgactggtccctg
gcctttgaacgcgctccgttgcgcgaacacttgtctcgtggccaggaaaagctcaccgcg
ctggcatgtgtgcttgcccaggcgacgctcttcgcggagcgccgaggcgaatggcccatc
gtcgcactggatgacctcgcctcggagctcgatgccacgcatcaggcatccgtggttcgt
cggctcacggccgccggagcgcaagtcctgctgactggaaccgagctaccgtcggccctg
cagtctgttccggcccaagtgttccacgtggaacaggggaccatcgcgcccctgctataa
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