Dyella sp. GSA-30: DYGSA30_09690
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Entry
DYGSA30_09690 CDS
T10269
Symbol
acoR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dyg Dyella sp. GSA-30
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dyg03000
]
DYGSA30_09690 (acoR)
Transcription factors [BR:
dyg03000
]
Prokaryotic type
Helix-turn-helix
Other families
DYGSA30_09690 (acoR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
PAS_4
PAS
HTH_30
HTH_23
AAA_2
HTH_28
Diguanyl_cycl_sensor
HTH_7
HTH_50
AAA
Trypsin_2
HTH_22
Motif
Other DBs
NCBI-ProteinID:
BDU19512
LinkDB
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Position
complement(1090243..1092168)
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AA seq
641 aa
AA seq
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MRSVLSNTSSTRIDSMLRERLGDVNVAPHVAKSWLRCIEEYGIDADAARDTPVLDAASIS
ERQQRFGELLNVARAEMENLYEQIAGSGYAVILCDAEAAILGAITDPSLKREFRGAGLRV
GAVWSERYEGTNGLGTCIAEGGPVTVYREEHFRHFNMDLSCSGAPVLDTQGEVLGVLDAS
TVNAADTRLIQRHTMALVAMSANLISRCHFLAECRDKWILRFHSRPEFVGLLHEALLAVD
SSGVVRAVNESALTQLGMSRDKLVGQSLERIFPFDFNTLEKRAFADAATLWPVRDAAYGR
RFFAMVRPPSVITNGVTLSAPAASPTSTRQHVGGDTRMQHNMNCGRQLFGRRVPLLLQGA
TGTGKEAFAKALHLASSWADKPFIAVNCAAIPEPLIESELFGYTRGAFTDASRDGHLGKI
RQSSGGTLFLDEIGDMPLRLQTRLLRVLEEHEVMPLGGERAIPVDLHVISATHQDLQKMV
QAGEFREDLYYRLNGITLQLPALRERTDKLDLIDTLLAEESQGLARPRLCDDALRLLLNY
TWPGNIRQLRNTLRTAAALCSDSVIRPCNLPQEITGYSAAEPAATSVAGNGDAPLRTAER
EALLRELEQMHWNISRTASALGISRNTLYRKLHKHGIVLPD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgtgttgtccaacacctcctcgacccgcatcgacagcatgctgcgtgagcgg
ctgggcgacgtaaacgtcgcgccacatgtcgccaaatcctggctgcgctgcatcgaggaa
tacggcatagacgccgacgcggcacgcgacacgcccgtactcgatgccgcctcgatcagc
gaacgccagcagcgttttggggagctgctgaatgtggcgcgggcggagatggaaaatctt
tacgaacagattgccggctcgggttatgcggtcattctgtgcgatgccgaagcggccatt
ctgggcgccatcaccgatccgtcgctcaagcgcgaatttcgcggcgccggcttgcgcgtc
ggcgctgtatggagcgagcgttacgagggcactaacggcctgggcacgtgcattgccgaa
ggcgggccggtcaccgtctatcgcgaagagcactttcgccacttcaacatggatctgtcg
tgctccggcgcgccggtgctcgatacgcagggcgaagtgctgggcgtgctggacgcgtct
accgtcaatgccgccgacacacgtctgatccagcgccatacgatggccttggtcgccatg
tcggccaaccttatttcacgctgccatttcctcgccgaatgccgtgacaaatggatcctg
cgttttcacagccgacccgagttcgtcggtctgttgcacgaagccctgctagccgtggac
agcagcggcgtcgtgcgggcggtcaacgaaagcgcgctgacccagctgggtatgtcgcgc
gacaaactggtcgggcagtcgctggagcggatcttcccattcgacttcaacaccctggaa
aaacgcgccttcgccgacgcggcgacgctgtggccggtgcgcgacgccgcctacggccgc
cgcttcttcgcgatggtgcggccgccttcggtgatcaccaacggtgtgacgctatcggca
cccgcggcgagcccgacatcgacacgccagcacgtcggcggcgatacgcgcatgcagcac
aatatgaattgcggccgccagttgttcggccgccgcgtaccgctcttgctgcagggcgca
accggtaccggcaaggaagcctttgccaaggcgctgcacctggccagcagctgggcggac
aagccgtttatcgcggtcaactgcgcggccattcccgagccgctgatcgaaagcgagctg
ttcggctacacccgtggcgcgtttaccgatgcctcgcgcgatggccatctgggcaagatc
cgccagtccagtggcgggacgctgtttctcgatgaaattggcgatatgccgttgcgtctg
cagacacgtctgctgcgcgtgctggaggagcatgaagtcatgcctttgggtggcgaacgc
gcgattccggtcgatctgcacgtcatcagcgccacccatcaggatctgcagaagatggta
caggcgggcgagtttcgcgaagacctgtattaccgactcaatggcatcacgctgcaattg
ccggcgctgcgggagcgcacggataaactggatctgatagacacgctgctggcggaggag
tcgcaagggctggcgcgaccaaggctgtgtgacgatgcgctgcgcttgctgctcaattac
acgtggccgggcaatatccgccagctacgcaatacgctgcgcactgccgcggcgctttgc
tccgatagcgtgattcggccatgcaacctgccgcaggaaatcaccggttacagcgctgcc
gaacctgccgccacatctgtcgcgggcaatggcgatgcgccgttgcgcaccgccgaacgc
gaggccttgctgcgtgagctcgaacagatgcactggaatatcagtcgtactgccagcgca
ttggggatcagtcgcaatacgttgtatcgcaagctgcacaagcatgggattgtgttgccg
gattga
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