Dyella sp. GSA-30: DYGSA30_11130
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Entry
DYGSA30_11130 CDS
T10269
Symbol
icd_1
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg00020
Citrate cycle (TCA cycle)
dyg00480
Glutathione metabolism
dyg00720
Other carbon fixation pathways
dyg01100
Metabolic pathways
dyg01110
Biosynthesis of secondary metabolites
dyg01120
Microbial metabolism in diverse environments
dyg01200
Carbon metabolism
dyg01210
2-Oxocarboxylic acid metabolism
dyg01230
Biosynthesis of amino acids
dyg04146
Peroxisome
Module
dyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dyg_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DYGSA30_11130 (icd_1)
09102 Energy metabolism
00720 Other carbon fixation pathways
DYGSA30_11130 (icd_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DYGSA30_11130 (icd_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DYGSA30_11130 (icd_1)
Enzymes [BR:
dyg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
DYGSA30_11130 (icd_1)
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Motif
Pfam:
IDH
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
BDU19656
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Position
1270973..1273207
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AA seq
744 aa
AA seq
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MQTMSQTPKIIYTLTDEAPFLATQSLLPVIEAFAATAGIAVETRDISLAGRILSQFPEYL
KDGQKIADDLTELGELATTPDANIIKLPNISASVPQLKAAVKELQSQGYALPDYVDEPKD
DKEKETKSRYARVMGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGAWSSDSKTHVAQM
DGGDFYGSEKSVTIAQPGSVKIEWFGKDGSSKVLKEKTSVQAGEVIDAAVMSKKALASFI
DAQIEDAKSQGVLFSLHLKATMMKVSDPIMFGLVVNEFYKDVLAKHADAIKQAGFDANNG
IGDLYARLKNLPADQQAAIEADLKAEYAKRPGLAMVNSDKGITNLHVPSDIIIDASMPAM
IRDSGKMWDAQGKLQDTKAVIPDRSYAGVYQVVIEDCKANGAFDPATMGSVPNVGLMAQK
AEEYGSHDKTFQIAGDGVVKVTDTSGNTLLEHTVEAGDIWRMCQTKDAPIQDWVKLAVNR
ARLSDTPAVFWLDAKRGHDAQIIKKVETYLKDHDTQGLDIRILSPVEATKLSLERIRKGQ
DTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEE
NYLRWDSLGEFLALAASFEHLSNRYNNADAGVLAKTLDQANGQFLDSNKSPARKVGELDN
RGSHFYLTLYWAQALAAQNEDAKLKARFAPLAKTLAENEAKIVGELNGVQGKPVEIEGYY
HPNLKLVSAAMRPSETFNKALASL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccatgtcccaaacacccaagatcatctacacgctcacggatgaagccccgttc
ctggctacgcagtccctgttgcccgttatcgaagcttttgccgccacggcgggcattgcc
gtcgagacccgcgatatttcgctggccggccgcattctttcgcagttccccgaatacctg
aaggacggccagaagatcgccgacgatctgactgagctgggcgagctggcgaccacgccg
gacgccaacatcatcaagctgccgaacatcagcgcctcggtgccgcagctgaaggccgcg
gtgaaagagttgcagtcgcagggctatgccttgcccgactacgtcgacgagcccaaggac
gacaaagaaaaagagaccaagtcgcgctatgcgcgggtcatgggcagtgcggtcaacccg
gtgctgcgcgaaggcaattccgatcgccgcgcaccgctgtcggtcaagaattatgcacgc
aagcacccgcatcgcatgggcgcatggagcagcgattccaaaacccacgtggcgcagatg
gacggcggtgatttctacggtagcgaaaagtcggtgaccatcgcccagccgggcagcgtc
aagatcgagtggttcggcaaggacggcagcagcaaggtcctgaaagaaaagaccagcgtg
caggctggtgaagtgatcgacgccgcggtcatgagcaagaaggccctcgccagctttatc
gatgcgcagatcgaggacgccaaaagccaaggcgtgctgttctcgctgcatctgaaggcg
accatgatgaaggtctccgatccgatcatgttcggtctggtagtcaacgagttctacaag
gatgtgctggccaagcacgccgatgcgatcaagcaggccggcttcgatgcgaacaacggc
atcggcgacctgtacgcgcggctgaagaatctgccggccgatcaacaggccgcgatcgag
gccgacctcaaggccgaatacgccaagcgcccaggtctggcgatggtcaactcggacaag
ggcattaccaacctgcacgtgcccagcgacatcatcatcgatgcgtcgatgccggcgatg
atccgcgactcgggcaagatgtgggatgcccagggcaagctgcaggacaccaaggcggtg
attccggatcgcagctatgcaggcgtctaccaggtcgtcatcgaagattgcaaagccaac
ggcgcgttcgacccggcgaccatgggcagcgtgcccaatgtcggcctgatggcgcagaag
gccgaggaatacggttcgcacgacaagactttccagatcgccggtgacggcgtggtcaag
gtgaccgataccagtggcaacacgttgctcgagcacaccgtcgaagccggcgacatctgg
cgcatgtgccagaccaaggacgcgccgatccaggattgggtcaagcttgccgtcaaccgc
gcgcgcctgagcgacacgccggcggtgttctggctggacgccaagcgcggtcacgatgcg
cagatcatcaagaaggtcgagacctatctgaaggaccacgatacccagggtctggatatc
cgcatcctctcgccggtcgaggccaccaagttgtcgctggagcgcattcgcaagggtcag
gacaccatttcggtgactggcaacgtgctgcgcgattacctcaccgacttgttcccgatc
atggagctgggcaccagcgcgaagatgctctccatcgtgccgctgatggccggtggcggc
ctgttcgaaaccggcgccggcggttcggcacccaagcatgtgcagcaattcgtcgaagag
aactatctgcgctgggattcgctgggcgagttcctggcgctggccgcttccttcgagcat
ctgagcaatcgctataacaatgccgacgccggtgtgttggccaagacgctcgaccaggcc
aacggccagttcctcgacagcaacaagtcgccggcacgcaaggtcggtgaactcgacaac
cgcggcagccacttctacctgaccctgtactgggcacaggccctggccgcgcagaacgag
gacgccaagctcaaggcgaggttcgcgccgctggccaagacgctggccgagaacgaggcg
aagatcgtcggcgagctcaatggcgtgcagggcaagccggtcgagatcgagggctattac
catccgaacctgaagctggtcagcgcggcgatgcgccccagtgaaacgttcaataaggcg
ctggcgtcgctgtaa
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