Dyella sp. GSA-30: DYGSA30_19420
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Entry
DYGSA30_19420 CDS
T10269
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dyg Dyella sp. GSA-30
Pathway
dyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DYGSA30_19420 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyg03400
]
DYGSA30_19420 (uvrB)
DNA repair and recombination proteins [BR:
dyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DYGSA30_19420 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DYGSA30_19420 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
BDU20485
LinkDB
All DBs
Position
2218117..2220147
Genome browser
AA seq
676 aa
AA seq
DB search
MTDRFQLVSPYKPAGDQPEAIKRLVEGFQAGLAAQTLLGVTGSGKTFTIANMIEQVQRPT
IVLAPNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLAATKALLSRKDSLIVATVSAIYGLGDPEDYLSLRLILAKGERIDQRALIRQLTELQ
YSRNEMELRRGTYRVRGEVIDVFPAESETEALRIELFDGEVENMALFDPLTGETIRKVPR
YTVYPRTHYASTRESVLNAIETIKVELKDRLEQLYKDNKLVEAQRLDQRTRFDVEMMAEV
GYCQGIENYSRHLTRRAPGEPPPTLFDYLPPDALLVVDESHVTIPQLGAMYKGDRSRKET
LVEFGFRLPSAMDNRPLRFEEWERRAPRSIYVSATPRDYELQHSGDAVVELVVRPTGLID
PEVEVRPVRTQVDDLLSEVHKRVAMGDRVLVTTLTKRMAENLTEYLGEHNVKVRYLHSDI
ETVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNVRGKAILYADNITRSMQAAMDETARRREKQVAYNEEHGITPQSVVRRIADIMEGA
RSEGAGNRGRGKSGRGRMAVAEESAEYAALSSSEASNMIKKLEAQMYKHAENLEFEDAAR
LRDKIGKLREHALRGS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgtttccagctcgtttccccgtataagcccgccggcgatcagccggaggcg
atcaaacgcctggtcgaaggcttccaggccggcctggccgcgcagacgctgctgggcgtg
accggctcgggcaagaccttcacgatcgccaacatgatcgagcaggtacagcggccgacc
atcgtgctggcgccgaacaagacgctggcggcgcagctatatggcgagttcaaggaattc
tttccgcacaatgcggtggagtacttcgtcagctactacgactactaccagccggaagcc
tatgtggtcgcctccgatacgtttatcgagaaggacgcctcgatcaacgagcatatcgag
cagatgcgtttggcggcgaccaaggcgctgttgtcgcgtaaggactcattgatcgtcgcg
accgtatcggcaatctatggcctcggtgatccggaagattatctgtcgctgcgcctgatc
ctggccaagggcgagcgcatcgaccagcgggcactgatccgtcagttgactgaattgcag
tacagccgcaacgagatggaactgcgtcgcggcacctatcgcgtgcgcggcgaggtgatc
gacgtgtttccggccgaatcggaaaccgaggcgttgcgcatcgaattgttcgatggcgaa
gtggaaaacatggcgctgttcgatccgctgaccggcgagacgattcgcaaggtgccgcgt
tacacggtgtatccgcgtacgcactacgcgagcacacgagagagcgtgctcaatgcgatc
gagacgatcaaggtcgaactgaaggatcggctggagcagctctacaaggacaacaagctg
gtcgaggcgcagcggctggatcagcgcacgcgtttcgacgtggagatgatggccgaggtc
ggttactgccagggcatcgagaactactcgcggcatctgacgcgtcgcgcgccgggcgag
ccgccgccgaccttgttcgattacctgcctcccgatgccttgctggtggtggacgagtcg
cacgtcaccattccgcagttgggtgcgatgtacaagggcgaccgttcgcgcaaggagacg
ctggtggagttcggctttcgcctgccttcggcgatggataaccgcccgttgcgtttcgag
gaatgggagcgtcgcgcaccgcgttcgatctacgtctccgcgacgccgcgcgattacgag
ttgcagcattcaggcgatgccgtggtcgaactggtggtgcgtcccaccggtctgattgat
ccggaagtcgaagtgcggccggtacgcacacaggtcgacgatttgctcagcgaagtgcac
aagcgcgtggcgatgggcgatcgcgtgctggtcacgacgctgaccaagcgcatggcggaa
aacctcactgagtacctcggcgagcacaacgtcaaggtgcgttatctgcactcggatatc
gagacggtcgagcgcgtggaaatcatccgcgacctgcgcctgggcgaattcgacgtactg
gtcggcatcaacctgctacgcgaaggcctggacatgcccgaggtgtcgctggtggcgatt
ctcgacgcagacaaggaaggctttctgcgttcgaccggttcgttgattcagaccatcggc
cgtgcggcgcgcaatgtacgtggcaaggcgattctctacgccgacaacatcacccgttcg
atgcaggcggcgatggacgaaaccgcgcgtcgtcgcgaaaagcaggtggcgtataacgaa
gagcacggcatcacgccgcagtcagtggtgcggcgcattgccgacatcatggagggtgcg
cgcagcgaaggcgctggcaaccgcgggcgtggcaagtcgggccgtgggcgaatggccgtg
gcggaagagagcgccgagtacgccgcgctcagttccagcgaggcatccaacatgatcaag
aagctcgaggcgcagatgtacaagcatgccgagaatctggagttcgaggatgcggcgcga
ttgcgcgacaagatcggcaagttgcgggagcatgccctgcggggcagttga
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integrated database retrieval system
