Dyella sp. GSA-30: DYGSA30_23950
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Entry
DYGSA30_23950 CDS
T10269
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dyg Dyella sp. GSA-30
Pathway
dyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DYGSA30_23950 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyg03400
]
DYGSA30_23950 (mutS)
DNA repair and recombination proteins [BR:
dyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DYGSA30_23950 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
BDU20938
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Position
complement(2726879..2729419)
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AA seq
846 aa
AA seq
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MRQYLSAKAEHPDVLLFFRMGDFYELFYDDARKAARLLDITLTQRGQSAGQPIPMAGVPY
HAAENYLARLVRLGESVAICEQIGDPALSKGPVERKVVRIVTPGTVTDAALLEERRDNLL
LAIAAGAQGAYGLAWADLSSGRFLLSEVPTAEALAAELARLQPAETLVSEDIAWPRLVTA
LPGVRKRPPWHFDGDAARRELNRFFGTRGLDGFGVDNLPLAIAAAGCLLGYVEETQKSAL
PHLSGMAVESASETIALDAATRRNLELDTHPSGRVEHTLLGVLDETVTPMGARLLRRWLN
RPLRSQDILRRRHQAVGMLIENRHYENLREPLRGIGDLERILARVALRSARPRDLSTLRD
GLAAAPNLRERIATLDSPLLHTLVESIGDHADIAALLARAVVEQPPVLQRDGGVIADGYD
AELDELRRLATNADQYLVEMEEREKAASGISTLKVGYNRVHGYYIEISKGQADKAPTHYT
RRQTTKNAERYITEELKTFEDKVLSAKERSLMRERALYEALLDSLIEKLEPLKAAASAMA
ALDVLATLAERAASLDWSEPKLIDAPGIAIERGRHPVVEKVRDEPFEPNDLKLDNERRML
VITGPNMGGKSTYMRQNALIVLLAHIGSYVPASSATIGPVDRIFTRIGAGDDLSRGQSTF
MVEMSETANILHNATEHSLVLMDEVGRGTSTYDGLALARAAAVHLAAASRAYTLFATHYF
ELTELATEYSTIANVHLDAVEYGEQLVFMHAVKEGPANRSFGLQVAALAGLPKSVIADAR
RTLAELERGMHAHVAKPAASTDASPQLGLFAAAPSVVELALEDIDPDALSPREALEALYR
LKHLKG
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagtacctgtcggccaaggccgagcacccggacgtgctgctgtttttccggatg
ggcgatttttatgagctgttctacgacgatgcgcgcaaggccgcgcgattgctggatatc
acgctgacccagcgtggccagtcggccgggcaaccgattccgatggccggcgtgccctat
cacgccgccgagaactatctggctcggctggtgcggctgggcgagtcggtggcgatctgc
gagcagatcggcgacccggccttgtccaaggggccggtcgaacgcaaggtggtccgcatc
gtcactcccggcacggtgaccgatgccgcgctgctggaagaacgccgcgacaacctgctg
ctggccatcgccgccggtgcccaaggtgcctacggactggcctgggcggatctttccagt
ggtcgctttctgcttagcgaagtgccgaccgccgaagccctggccgcggagctggcgcgc
ctgcagccggccgaaaccctggtcagcgaagatatcgcctggcctcgcctggtcaccgcc
ctgcccggcgtgcgcaagcgcccgccgtggcatttcgacggcgatgcggcgcgacgcgaa
ctcaatcgtttcttcggcacacgcggcctcgatggctttggcgtcgacaacctgccgctg
gcaatcgccgctgccggctgcctgctgggctatgtcgaagagacgcagaaaagcgcacta
ccgcatctttcgggcatggcggtggaaagcgccagcgaaacgatcgcgctggacgcggcc
acgcgccgcaacctggagctggacacgcacccgagcggccgcgtcgaacacaccctgctc
ggcgtactcgacgagacggtgacgccgatgggcgcacgcctgctccgccgctggctcaat
cgtcccttgcgttcgcaggacatcttgcgccgccgtcatcaggcggtcggcatgctgatc
gagaatcgccattacgaaaacctccgcgaaccgttgcgcggtatcggcgatctcgaacgc
atcctggctcgcgtggcgctgcgttccgcacggccacgcgatctttccaccttgcgcgac
ggtctggctgctgcacccaacttgcgtgagcggatcgccacgctcgacagtccgctcttg
cacacactggtggagagcatcggcgaccacgccgatatcgctgccctgctggcgcgcgcc
gtggtggaacagccgccggtcctgcagcgcgacggcggcgtgatcgccgatggctacgac
gcggaactggacgagctgcgtcgactggccaccaatgccgaccagtatctggtcgagatg
gaagaacgcgaaaaagccgccagcggcatcagcacgctgaaagtcggctacaaccgcgta
cacggctactacatcgaaatcagcaaggggcaggccgacaaggcaccgacgcattacaca
cgccggcagaccaccaagaacgccgagcgctacatcaccgaagagttgaaaaccttcgaa
gacaaggtgctgtcggccaaggaacgttcgctgatgcgcgagcgggcgctgtacgaagcg
ctgctcgacagcctgatcgaaaaactcgaaccgctcaaagccgctgcatccgccatggcc
gcgctcgacgtgctcgccacgctggccgagcgcgcggcgtcgctggattggagcgaacca
aagctgatcgatgcgcccggcatcgccatcgagcgcggtcgccacccggtcgtcgaaaag
gttcgcgacgaacccttcgagccgaacgatctgaagctcgacaacgaacgccgcatgctg
gtgatcaccggcccgaacatgggcggtaaatcgacctatatgcgccagaacgcactgatc
gtgctgctcgcgcatatcggcagctacgtgccggccagcagcgccacgatcggcccggtc
gatcgcatcttcacgcgtatcggcgccggcgatgacctctcgcgcggccagtccaccttc
atggtggaaatgagcgagacggcgaacattcttcacaacgccaccgaacacagcctggtg
ctgatggacgaagtcggccgcggcaccagcacttacgatggcctggcactcgcacgcgcc
gccgcggtgcatctggctgcggccagtcgcgcctataccttgttcgcgacgcattacttc
gaactgaccgagctggccaccgagtattcgaccatcgccaacgtgcatctggatgcagtg
gagtacggcgagcagttggtcttcatgcatgcggtcaaggaagggcccgccaatcgcagt
ttcggtttgcaggtagcggcgctggctggtttgcccaagagcgtgattgccgatgcgcgg
cgcaccctggccgagcttgaacgcggcatgcacgcgcatgtggcgaagccggccgcgtcg
accgatgcatcgccgcagctgggtttgtttgctgctgcgccttcggttgtcgagctcgcg
ctggaagatatcgatccggatgcactttcgccgcgtgaggcgcttgaggcgctttatcgg
ttgaagcatttgaagggttga
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