Dyella sp. GSA-30: DYGSA30_25780
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Entry
DYGSA30_25780 CDS
T10269
Symbol
lysA_1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg00300
Lysine biosynthesis
dyg00470
D-Amino acid metabolism
dyg01100
Metabolic pathways
dyg01110
Biosynthesis of secondary metabolites
dyg01120
Microbial metabolism in diverse environments
dyg01230
Biosynthesis of amino acids
Module
dyg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DYGSA30_25780 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DYGSA30_25780 (lysA_1)
Enzymes [BR:
dyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DYGSA30_25780 (lysA_1)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDU21121
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Position
complement(2975214..2976425)
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AA seq
403 aa
AA seq
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MNTSDSLPRVRAAVDRLRVESGEPVCAYVYDLDALQRHVRWMRAALPEGCELYYAAKANA
EAPILDTLAPWVDGFEAASGGELRWLRQAQPGKPLLFGGPGKLDSELELALDQPGCTLHV
ESLGELHRLAAIAERLGCKASIFLRMNIGVPGMGDTRLMMGGKPTPFGLDEADLPAALEA
LRGYPQLHLEGFHFHLMSHQRDAGAQLMLVRAYLDIVHRLQEAYGIKVQIVNAGGGFGVD
YAEPARSFDWLDFCEGLKRLLSERQEALRLRFEPGRYVSVGCGWYVMEVLDIKRSHGEYF
AVARGGTHHFRTPPAQGHDHPFVVLRGTQQPVVQDTRVTLVGQLCTPKDVLARQQPIAAL
APGDCLAFSLAGAYAWNISHQNFLMHPPPRMVFLDSGPPGTAG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcgattcgctgccgcgcgtgcgtgccgccgtcgaccgactacgtgtcgaa
tcgggcgagcccgtttgtgcctacgtttacgatctcgacgccttgcaacgccatgtccgc
tggatgcgcgcggcgcttcccgagggctgcgagctttactacgcggccaaggccaatgcc
gaagcgccgatcctggacacattggcgccgtgggtcgacggtttcgaagcggcatccggc
ggcgaattgcgctggttgcgccaagcccagcccggcaagccgctattgttcggcggcccc
ggcaagctcgatagcgagctcgaactggcactcgaccaacccggctgcaccttgcatgtg
gaaagcctgggcgaacttcatcggctggccgccatcgccgaacgccttggctgcaaggca
tcgatcttcctgcgcatgaatatcggcgtgccgggcatgggcgatacgcggctgatgatg
ggcggcaagcccacacccttcgggctggacgaggccgacctccctgctgctctggaagcc
ttgcgcggctacccgcaactgcatctggagggcttccactttcatctgatgtcgcaccag
cgcgatgccggcgcgcagctcatgctggtccgcgcctatctggatatcgtgcaccgcttg
caagaggcatacgggatcaaggtgcagatcgtgaatgccggcggtggttttggcgtggac
tatgccgagccggcccgttcgttcgactggctcgacttctgcgaaggcctcaaacgcctg
ttgagcgaacgccaggaagcactgcgcctgcgtttcgaaccggggcgctacgtcagcgtc
ggctgcggctggtacgtcatggaagtgctcgatatcaagcgcagccacggcgagtacttt
gcggtggcgcgtggcggcacccaccacttccgtacgccgcctgcccaaggacacgaccat
ccctttgtggtgttgcgcggcacgcagcagccggtcgtccaggacacgcgcgtcaccctg
gtcgggcagctctgcaccccgaaggacgtgctcgcccggcaacagccgatcgccgcgctg
gcgcccggcgactgcctggcgttttccctggccggcgcctatgcctggaatatctcgcac
cagaatttcctgatgcatcccccgccgcggatggtgtttctggatagcgggccccctggc
accgccggttag
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