KEGG   Dyella sp. GSA-30: DYGSA30_25780
Entry
DYGSA30_25780     CDS       T10269                                 
Symbol
lysA_1
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
dyg  Dyella sp. GSA-30
Pathway
dyg00300  Lysine biosynthesis
dyg00470  D-Amino acid metabolism
dyg01100  Metabolic pathways
dyg01110  Biosynthesis of secondary metabolites
dyg01120  Microbial metabolism in diverse environments
dyg01230  Biosynthesis of amino acids
Module
dyg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dyg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DYGSA30_25780 (lysA_1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DYGSA30_25780 (lysA_1)
Enzymes [BR:dyg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     DYGSA30_25780 (lysA_1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BDU21121
LinkDB
Position
complement(2975214..2976425)
AA seq 403 aa
MNTSDSLPRVRAAVDRLRVESGEPVCAYVYDLDALQRHVRWMRAALPEGCELYYAAKANA
EAPILDTLAPWVDGFEAASGGELRWLRQAQPGKPLLFGGPGKLDSELELALDQPGCTLHV
ESLGELHRLAAIAERLGCKASIFLRMNIGVPGMGDTRLMMGGKPTPFGLDEADLPAALEA
LRGYPQLHLEGFHFHLMSHQRDAGAQLMLVRAYLDIVHRLQEAYGIKVQIVNAGGGFGVD
YAEPARSFDWLDFCEGLKRLLSERQEALRLRFEPGRYVSVGCGWYVMEVLDIKRSHGEYF
AVARGGTHHFRTPPAQGHDHPFVVLRGTQQPVVQDTRVTLVGQLCTPKDVLARQQPIAAL
APGDCLAFSLAGAYAWNISHQNFLMHPPPRMVFLDSGPPGTAG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaataccagcgattcgctgccgcgcgtgcgtgccgccgtcgaccgactacgtgtcgaa
tcgggcgagcccgtttgtgcctacgtttacgatctcgacgccttgcaacgccatgtccgc
tggatgcgcgcggcgcttcccgagggctgcgagctttactacgcggccaaggccaatgcc
gaagcgccgatcctggacacattggcgccgtgggtcgacggtttcgaagcggcatccggc
ggcgaattgcgctggttgcgccaagcccagcccggcaagccgctattgttcggcggcccc
ggcaagctcgatagcgagctcgaactggcactcgaccaacccggctgcaccttgcatgtg
gaaagcctgggcgaacttcatcggctggccgccatcgccgaacgccttggctgcaaggca
tcgatcttcctgcgcatgaatatcggcgtgccgggcatgggcgatacgcggctgatgatg
ggcggcaagcccacacccttcgggctggacgaggccgacctccctgctgctctggaagcc
ttgcgcggctacccgcaactgcatctggagggcttccactttcatctgatgtcgcaccag
cgcgatgccggcgcgcagctcatgctggtccgcgcctatctggatatcgtgcaccgcttg
caagaggcatacgggatcaaggtgcagatcgtgaatgccggcggtggttttggcgtggac
tatgccgagccggcccgttcgttcgactggctcgacttctgcgaaggcctcaaacgcctg
ttgagcgaacgccaggaagcactgcgcctgcgtttcgaaccggggcgctacgtcagcgtc
ggctgcggctggtacgtcatggaagtgctcgatatcaagcgcagccacggcgagtacttt
gcggtggcgcgtggcggcacccaccacttccgtacgccgcctgcccaaggacacgaccat
ccctttgtggtgttgcgcggcacgcagcagccggtcgtccaggacacgcgcgtcaccctg
gtcgggcagctctgcaccccgaaggacgtgctcgcccggcaacagccgatcgccgcgctg
gcgcccggcgactgcctggcgttttccctggccggcgcctatgcctggaatatctcgcac
cagaatttcctgatgcatcccccgccgcggatggtgtttctggatagcgggccccctggc
accgccggttag

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